Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is aroL [H]
Identifier: 218688251
GI number: 218688251
Start: 427373
End: 427897
Strand: Direct
Name: aroL [H]
Synonym: ECED1_0411
Alternate gene names: 218688251
Gene position: 427373-427897 (Clockwise)
Preceding gene: 218688250
Following gene: 218688252
Centisome position: 8.2
GC content: 52.57
Gene sequence:
>525_bases ATGACACAACCTCTTTTTCTGATCGGGCCTCGGGGCTGTGGTAAAACAACGGTCGGAATGGCCCTTGCCGATTCGCTTAA CCGTCGGTTTGTCGATACCGACCAGTGGTTGCAATCACAGCTCAATATGACGGTCGCGGACATCGTCGAAAGGGAAGAGT GGGCGGGATTCCGCGCCAGAGAAACGGCGGCGCTGGAAGCGGTAACTGCGCCATCCACCGTTATCGCCACGGGCGGCGGC ATTATTCTGACGGAATTTAATCGTCACTTCATGCAAAATAACGGGATCGTGGTTTATTTGTGTGCGCCAGTATCAGTCCT GGTTAACCGACTGCAAGCTGCACCGGAAGAAGATTTACGGCCAACCTTAACGGGAAAACCACTGAGCGAAGAAGTTCAGG AAGTGCTGGAAGAACGCGATGCGCTATATCGCGAAGTTGCGCATATTATCATCGACGCAACAAACGAACCCAGCCAGGTG ATTTCTGAAATTCGCAGCGCTCTGGCACAGACGATCAATTGTTGA
Upstream 100 bases:
>100_bases TTTTTTCTTTACAATCGAAATTGTACTAGTTTGATGGTATGATCGCTATTCTCATGACACCGGCTTTCGCCGCATTGCGA CCTATTGGGGAAAACCCACG
Downstream 100 bases:
>100_bases TTTTCGAGCGCCTATACTTAACGTTCATCCCGTGAAATAAGGAAGAACGATGCCAACGAAACCGCCTTATCCTCGTGAAG CATATATAGTGACGATTGAA
Product: shikimate kinase II
Products: NA
Alternate protein names: SK 2 [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVADIVEREEWAGFRARETAALEAVTAPSTVIATGGG IILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV ISEIRSALAQTINC
Sequences:
>Translated_174_residues MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVADIVEREEWAGFRARETAALEAVTAPSTVIATGGG IILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV ISEIRSALAQTINC >Mature_173_residues TQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVADIVEREEWAGFRARETAALEAVTAPSTVIATGGGI ILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVI SEIRSALAQTINC
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family. AroL subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786587, Length=174, Percent_Identity=99.4252873563218, Blast_Score=355, Evalue=1e-99, Organism=Escherichia coli, GI87082255, Length=160, Percent_Identity=33.75, Blast_Score=88, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19137; Mature: 19006
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVADIVEREEWAGFRAR CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHH ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR HHHHHHHHCCCCEEEEECCCEEEEHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCC PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVADIVEREEWAGFRAR CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHH ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR HHHHHHHHCCCCEEEEECCCEEEEHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCC PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA