Click here to switch to the map view.

The map label for this gene is yrbE [H]

Identifier: 218688161

GI number: 218688161

Start: 333061

End: 334083

Strand: Direct

Name: yrbE [H]

Synonym: ECED1_0315

Alternate gene names: 218688161

Gene position: 333061-334083 (Clockwise)

Preceding gene: 218688160

Following gene: 218688162

Centisome position: 6.39

GC content: 46.14

Gene sequence:

>1023_bases
ATGAAAAAGCTTCGATGTGGTGTTATTGGCCTTGGTCGGGTAGGTAAAATGCATGTTGAAAATATGTATTTACTGCCTCA
ATTAGATATTATCTGCGCCGCCGATTATTTTATTGAGGAGATGAGCGATTGGCTTTATTCGGTAAATATAACTTCAGGGT
ATAAAAATTATCAGGAACTTTTACAGCGTGATGATATAGAGGCAGTTTTTATTTTCACCTCAACGGATATGCACGAAGAG
ATCGTCACGGCGGCAGCGCAGGCGGGGAAGCACATTTTTTGTGAAAAACCGCTCAGCATGAATGAAGATGAGCAGGCCTC
AATGGCGGTGCTGAGAAAAGTGAAAGAGAAGGGGGTGACGCTGCAGGTTGCCTTTAATCGCCGTTTTGATCCTCAGTTTC
ACGAGGTCTTTGAGCTGGTGCGCAGCGGCAAGATTGGTCGGCCCCAGATGATAAAAATCACCTCCCGCGATCCGGACCTG
CTACCCCATGATCTGATCAAACGTATTGGCGGTCTGATTTTTGACTTCACCATGCATGACTTTGATATGGCTCGTTTTAT
GATGCAGGATGAAGTCAGCGAAGTCTATGTTAAGGGCAATACGCTGATTGATCCCAGCCTGAAAAATATTGATGATGTTG
ATACGCTTGCGGTGATGCTGACTTTCAGAAACGGCGGCTACGCGCTCATTGATAACAGCCGTCGGGCGGTATATGGCTAT
GACCAACGGGTGGAGGTTTTTGGCTCAGAAGGGATGGCGTATGCGGATAACGTTAGTGAATCGACGGTGAAAGTTTTCAA
CAGCCAGCACTGCATAATGAAAAATCCTCTTCCTGATTTCACGGTCCGTTATCGCGAAGCTTACCGAACGGAAATATTAC
ACTTTATTGATTCAGTCCTGCATCATACGCCGGTTGTCTGTACCGGCGAAGACGCATTATTGGCCCAGCGTATCGCTATT
GCCGCGCAGCAATCATTAAAAAGCGGGCTGCCGGTGAAAATAACAAGCGATATTTATCTTTGA

Upstream 100 bases:

>100_bases
TTTTCAGAACGGCAAAATAAAACGATCCGTTTTTCGCAGAATTACGGATGCTTTTCTTTTGCGGTTTTAAATTTACTATT
CATGAGATTAAGAGGTACGA

Downstream 100 bases:

>100_bases
CTGCATCTGTTAATAATGAATAAACTCTCGCACTGAAAAGTGTGAGAGCTTTTCTATACCGAGGTTAATAAAATGAAAGA
AACGCAGGCAACGCTGCCCC

Product: putative myo-inositol 2-dehydrogenase (iolG-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKKLRCGVIGLGRVGKMHVENMYLLPQLDIICAADYFIEEMSDWLYSVNITSGYKNYQELLQRDDIEAVFIFTSTDMHEE
IVTAAAQAGKHIFCEKPLSMNEDEQASMAVLRKVKEKGVTLQVAFNRRFDPQFHEVFELVRSGKIGRPQMIKITSRDPDL
LPHDLIKRIGGLIFDFTMHDFDMARFMMQDEVSEVYVKGNTLIDPSLKNIDDVDTLAVMLTFRNGGYALIDNSRRAVYGY
DQRVEVFGSEGMAYADNVSESTVKVFNSQHCIMKNPLPDFTVRYREAYRTEILHFIDSVLHHTPVVCTGEDALLAQRIAI
AAQQSLKSGLPVKITSDIYL

Sequences:

>Translated_340_residues
MKKLRCGVIGLGRVGKMHVENMYLLPQLDIICAADYFIEEMSDWLYSVNITSGYKNYQELLQRDDIEAVFIFTSTDMHEE
IVTAAAQAGKHIFCEKPLSMNEDEQASMAVLRKVKEKGVTLQVAFNRRFDPQFHEVFELVRSGKIGRPQMIKITSRDPDL
LPHDLIKRIGGLIFDFTMHDFDMARFMMQDEVSEVYVKGNTLIDPSLKNIDDVDTLAVMLTFRNGGYALIDNSRRAVYGY
DQRVEVFGSEGMAYADNVSESTVKVFNSQHCIMKNPLPDFTVRYREAYRTEILHFIDSVLHHTPVVCTGEDALLAQRIAI
AAQQSLKSGLPVKITSDIYL
>Mature_340_residues
MKKLRCGVIGLGRVGKMHVENMYLLPQLDIICAADYFIEEMSDWLYSVNITSGYKNYQELLQRDDIEAVFIFTSTDMHEE
IVTAAAQAGKHIFCEKPLSMNEDEQASMAVLRKVKEKGVTLQVAFNRRFDPQFHEVFELVRSGKIGRPQMIKITSRDPDL
LPHDLIKRIGGLIFDFTMHDFDMARFMMQDEVSEVYVKGNTLIDPSLKNIDDVDTLAVMLTFRNGGYALIDNSRRAVYGY
DQRVEVFGSEGMAYADNVSESTVKVFNSQHCIMKNPLPDFTVRYREAYRTEILHFIDSVLHHTPVVCTGEDALLAQRIAI
AAQQSLKSGLPVKITSDIYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Drosophila melanogaster, GI24581117, Length=244, Percent_Identity=26.2295081967213, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 38699; Mature: 38699

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRCGVIGLGRVGKMHVENMYLLPQLDIICAADYFIEEMSDWLYSVNITSGYKNYQEL
CCCCEECEEECCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH
LQRDDIEAVFIFTSTDMHEEIVTAAAQAGKHIFCEKPLSMNEDEQASMAVLRKVKEKGVT
HHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCE
LQVAFNRRFDPQFHEVFELVRSGKIGRPQMIKITSRDPDLLPHDLIKRIGGLIFDFTMHD
EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEHHHH
FDMARFMMQDEVSEVYVKGNTLIDPSLKNIDDVDTLAVMLTFRNGGYALIDNSRRAVYGY
HHHHHHHHHHHHHHEEEECCEEECCCCCCCCHHHEEEEEEEEECCCEEEEECCCCEEECC
DQRVEVFGSEGMAYADNVSESTVKVFNSQHCIMKNPLPDFTVRYREAYRTEILHFIDSVL
CCEEEEECCCCCEECCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
HHTPVVCTGEDALLAQRIAIAAQQSLKSGLPVKITSDIYL
HCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MKKLRCGVIGLGRVGKMHVENMYLLPQLDIICAADYFIEEMSDWLYSVNITSGYKNYQEL
CCCCEECEEECCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH
LQRDDIEAVFIFTSTDMHEEIVTAAAQAGKHIFCEKPLSMNEDEQASMAVLRKVKEKGVT
HHHCCCCEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCE
LQVAFNRRFDPQFHEVFELVRSGKIGRPQMIKITSRDPDLLPHDLIKRIGGLIFDFTMHD
EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEHHHH
FDMARFMMQDEVSEVYVKGNTLIDPSLKNIDDVDTLAVMLTFRNGGYALIDNSRRAVYGY
HHHHHHHHHHHHHHEEEECCEEECCCCCCCCHHHEEEEEEEEECCCEEEEECCCCEEECC
DQRVEVFGSEGMAYADNVSESTVKVFNSQHCIMKNPLPDFTVRYREAYRTEILHFIDSVL
CCEEEEECCCCCEECCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
HHTPVVCTGEDALLAQRIAIAAQQSLKSGLPVKITSDIYL
HCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]