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The map label for this gene is hcpA [H]

Identifier: 218688101

GI number: 218688101

Start: 263724

End: 264242

Strand: Direct

Name: hcpA [H]

Synonym: ECED1_0240

Alternate gene names: 218688101

Gene position: 263724-264242 (Clockwise)

Preceding gene: 218688086

Following gene: 218688102

Centisome position: 5.06

GC content: 54.34

Gene sequence:

>519_bases
ATGCCAACCCCATGTTACATTTCAATTACAGGTCAGACCCAGGGGAACATCACTGCCGGTGCTTTCACCGCAGATTCTGT
CGGCAATATCTACGTGCAGGGACACGAAGATGAAATGCTGGTGCAGGAGTTTCTGCATAACGTTACTGTTCCAACCGATC
CGCAGTCTGGTCAGCCTTCCGGGCAGCGTGCTCACAAACCGTTCATTTTCACCGTGGCGCTGAACAAAGCCGTTCCGCTG
CTGTACAACGCGCTGGCCTCCGGTGAAATGCTGCCGAAAGTGGAGCTGCACTGGTGGCGTACCTCTGTTGAAGGCAAGCA
GGAGCACTACTTCACCACACGTCTTACTGACGCGACGATTGTGGACATGAACCTGCATATGCCGCACTGCCAGGACCCTG
CACAGCGTGAGTTTACGCAATTGCTCGCAGTATCACTGGCCTACCGTAAGGTTGAGTGGGAGCACATCAAATTCGGTACT
TCTGGTGCCGATGACTGGCGTGCACCGCTGGAAGCATAA

Upstream 100 bases:

>100_bases
TGTGGTTCCTGATGTGAGCCGCATCACACTCTAACCTGTCGGGGATTAACGACGGGTTGTTCGTAAAACAGCAGTTGATA
ATTTCACAAGGAGTTCATAA

Downstream 100 bases:

>100_bases
ATCTGAGTCAACAACATCCTGCCTCCGTGCAGGATGTTGTTTTTGTACGTGTAAAAAATGAGTGTCAGTAAGGAGTTACG
CTTTCATGAGGGAGATGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPSGQRAHKPFIFTVALNKAVPL
LYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATIVDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKFGT
SGADDWRAPLEA

Sequences:

>Translated_172_residues
MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPSGQRAHKPFIFTVALNKAVPL
LYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATIVDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKFGT
SGADDWRAPLEA
>Mature_171_residues
PTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPSGQRAHKPFIFTVALNKAVPLL
YNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATIVDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKFGTS
GADDWRAPLEA

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 19251; Mature: 19120

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPS
CCCCEEEEEECCCCCCEEECEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC
GQRAHKPFIFTVALNKAVPLLYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATI
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEE
VDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKFGTSGADDWRAPLEA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPS
CCCEEEEEECCCCCCEEECEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC
GQRAHKPFIFTVALNKAVPLLYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATI
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEE
VDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKFGTSGADDWRAPLEA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]