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The map label for this gene is yafT [H]

Identifier: 218688086

GI number: 218688086

Start: 242282

End: 243067

Strand: Direct

Name: yafT [H]

Synonym: ECED1_0221

Alternate gene names: 218688086

Gene position: 242282-243067 (Clockwise)

Preceding gene: 218688085

Following gene: 218688101

Centisome position: 4.65

GC content: 39.44

Gene sequence:

>786_bases
ATGAATTTAAAAAAGGTTTGTTGTATATGTGTATTATTCTCGCTGCTTGCAGGATGTGCCTCTGAATCTCCTATTGATGA
AAAAAAGAAAAAAACTCAAACCACACAAATTTCTATTAATAAAAACGTTCCCCAGCAACTAACAGACAAAGATTTATATG
GTAATGAAACCACACTGGCTGTATCCGAGGAGGATATTCAAGCTGCGCTTGAAGGAGATGAGTTTCGTGTGCCTCTTAAT
TCTCCTGTAATACTTGTTCAGTCTGGCAGTCGCGCACCGGAAACCATTATGCAGGAGGAGATGAGAAAATATTATACAGT
TGCCACATTTTCTGGCATTCCTGACAGGAAAAAAACTGTAACCTGTAATAAAGACAAAAACAAAGATGAAAGCCTGGATA
TTGTAGATGCCGAAAATATGAACTGGATGCAGGCATTGCGTTTTGTTGCAGCAAAAGGCCATCAGAAAGCGATTATTGTT
TTCCAGGATACGTTGCAGACAGGAAAATATGACTCTGGATTGAAATCAATAGTTTGGACAGATTATAAAAATCAAAAATT
GACTGACACGATGTCACTGCGTTATTTGGTTCGATTCACGTTGGTGGATGTGGCTACAGGTGAGTGGGCTACCTGGTCGC
CTGTGAATTATGAATCGAAAGTGATTTTTCCGCAGATAGGGAATAAAAATTCTGACAGCCTTGATGTGGCAGAACAGCAG
ATTTCACAACTTAAGCAGAAAACGTATGCAGCAGTGGTTAAAGACCTGGTGAATCGATATCAGTAG

Upstream 100 bases:

>100_bases
TGCTGTTATTTTTTGTTTGTTCTGATTCAAGTGGAGTATATAATTAAAAATCGTTAGCTAAACATTACCATGATTATGAC
AGGCGAGGGAGTGTCCGATT

Downstream 100 bases:

>100_bases
TGAGGTTTTATACCAGACGTTTTAGTGGTACTTAGCAAGAAAGAGCATTTCTCTTTTCTATTTTACACTATGGAACAAGT
CTGCTAATTAATTTTACATA

Product: putative aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLAVSEEDIQAALEGDEFRVPLN
SPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTVTCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIV
FQDTLQTGKYDSGLKSIVWTDYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ
ISQLKQKTYAAVVKDLVNRYQ

Sequences:

>Translated_261_residues
MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLAVSEEDIQAALEGDEFRVPLN
SPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTVTCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIV
FQDTLQTGKYDSGLKSIVWTDYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ
ISQLKQKTYAAVVKDLVNRYQ
>Mature_261_residues
MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLAVSEEDIQAALEGDEFRVPLN
SPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTVTCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIV
FQDTLQTGKYDSGLKSIVWTDYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ
ISQLKQKTYAAVVKDLVNRYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786410, Length=261, Percent_Identity=81.2260536398467, Blast_Score=445, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29468; Mature: 29468

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLA
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCCCCHHHCCCCCCCCCEEEE
VSEEDIQAALEGDEFRVPLNSPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTV
ECHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEE
TCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIVFQDTLQTGKYDSGLKSIVWT
EECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHEEEC
DYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
ISQLKQKTYAAVVKDLVNRYQ
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLA
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCCCCHHHCCCCCCCCCEEEE
VSEEDIQAALEGDEFRVPLNSPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTV
ECHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEE
TCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIVFQDTLQTGKYDSGLKSIVWT
EECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHEEEC
DYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
ISQLKQKTYAAVVKDLVNRYQ
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]