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The map label for this gene is yadD [H]

Identifier: 218688010

GI number: 218688010

Start: 152860

End: 153840

Strand: Direct

Name: yadD [H]

Synonym: ECED1_0137

Alternate gene names: 218688010

Gene position: 152860-153840 (Clockwise)

Preceding gene: 218688008

Following gene: 218688025

Centisome position: 2.93

GC content: 47.81

Gene sequence:

>981_bases
ATGGATGCACCGAGTACCACACCGCATGATGCGGTGTTTAAACAATTTTTAATGCATGCGGAAACGGCTCGCGACTTTCT
GGATATCCATTTGCCAGCGGAGCTACGCGAACTGTGTGACCTCGACACGCTGCATCTTGAGTCGGGGAGTTTTATTGAAG
AAAGCCTGAAAGGGCACAGCACTGACGTGCTCTATTCCGTACAGATGCAGGGTAGTACGGGTTATCTGCATGTTGTGATT
GAACACCAAAGCAAGCCAGATAAGAAAATGGCCTTTCGCATGATGCGTTATTCTATTGCTGCCATGCACCGGCATCTGGA
GGCTGATCACGATAAGCTGCCGCTGGTGGTGCCAATTCTGTTTTATCAGGGCGAGGCCACACCTTATCCGCTATCAATGT
GCTGGTTTGATATGTTTTACTCACCGGAACTGGCGCGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACTATC
ACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTGCTGCAAAAACATATTCGCCAGCGCGACTT
AATGTTATTGCTGGAGCAACTGGTCACGTTGATTGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACT
ATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTATGGTGTGGTGAGAGACAGGGAAACGGGAGGGGAGTCT
ATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAAAAAGGAATGGTGAAAGGAATGGAGAAAGGGATTGAGCG
GGGGATTGAGAAAGGAATGGTGAAAGGAATAGAGATAGGAATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTC
AGGAATTCGCCCTGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGTAAATTTACCTCTTGCTGAG
ATTGATAAAATGATTAACTAA

Upstream 100 bases:

>100_bases
TTATCTGAACGCTGCTCGGTAAACACTAAAGAGGCGGCTGACGACGGCACACCATGACTGGATACTGCCTTCACGCAAGA
CCACACGGAAGGCAGGGAAG

Downstream 100 bases:

>100_bases
GTTGTCTGCATTATGAATAATTGCCTACAGATAACGTGGCAATGAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGC
ATTACGCCAGTTCGACCAGT

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHSTDVLYSVQMQGSTGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES
MMTLAQWFEEKGIEKGMVKGMEKGIERGIEKGMVKGIEIGIEKGIQQGRQEVSQEFALRLLSKGMSREDVAEMVNLPLAE
IDKMIN

Sequences:

>Translated_326_residues
MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHSTDVLYSVQMQGSTGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES
MMTLAQWFEEKGIEKGMVKGMEKGIERGIEKGMVKGIEIGIEKGIQQGRQEVSQEFALRLLSKGMSREDVAEMVNLPLAE
IDKMIN
>Mature_326_residues
MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHSTDVLYSVQMQGSTGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES
MMTLAQWFEEKGIEKGMVKGMEKGIERGIEKGMVKGIEIGIEKGIQQGRQEVSQEFALRLLSKGMSREDVAEMVNLPLAE
IDKMIN

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1786324, Length=326, Percent_Identity=88.6503067484662, Blast_Score=587, Evalue=1e-169,
Organism=Escherichia coli, GI1788643, Length=275, Percent_Identity=53.4545454545455, Blast_Score=309, Evalue=1e-85,
Organism=Escherichia coli, GI1788577, Length=284, Percent_Identity=50, Blast_Score=287, Evalue=7e-79,
Organism=Escherichia coli, GI1789816, Length=266, Percent_Identity=50.3759398496241, Blast_Score=283, Evalue=9e-78,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 37348; Mature: 37348

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCCHHHHHHCCCC
TDVLYSVQMQGSTGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL
CEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
MMTLAQWFEEKGIEKGMVKGMEKGIERGIEKGMVKGIEIGIEKGIQQGRQEVSQEFALRL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKGMSREDVAEMVNLPLAEIDKMIN
HHCCCCHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCCHHHHHHCCCC
TDVLYSVQMQGSTGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL
CEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
FYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
MMTLAQWFEEKGIEKGMVKGMEKGIERGIEKGMVKGIEIGIEKGIQQGRQEVSQEFALRL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKGMSREDVAEMVNLPLAEIDKMIN
HHCCCCHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]