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The map label for this gene is yadE [H]

Identifier: 218688008

GI number: 218688008

Start: 150973

End: 152202

Strand: Direct

Name: yadE [H]

Synonym: ECED1_0135

Alternate gene names: 218688008

Gene position: 150973-152202 (Clockwise)

Preceding gene: 218688007

Following gene: 218688010

Centisome position: 2.9

GC content: 48.37

Gene sequence:

>1230_bases
ATGTACAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGCGTCAGTGCCGCATTACCTGCCCATTATATGCA
AACCATCGAAAATGCCGCGGTCTGGGCGCAAATTGGTGACAAGATGGTGACGGTGGGGAATATTCGGGCCGGACAAATCA
TTGCCGTGGAGCCCACTGCCGCAAGTTATTACGTATTTAATTTTGGCTTTGGTAAAGGGTTTATCGATAAAGGCCATCTC
GAGCCGGTTCAGGGGCGACAAAAAGTTGAAGATGGTTTAGGTGACCTCAACAAGCCGCTGAGTAATCAGAACTTAATAAC
CTGGAAAGATACGCCGGTTTATAACGCGCCGAGTGTGGGCAGTGCGCCATTTGGAGTACTGGCGGACAATTTGCGCTACC
CGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGCATTGGCGATCGACTGGCCTATATCAGC
GCGCTGGATGCCCAACCCGATAATGGCTTGCCGGTGCTAACCTATCACCATATTTTGCGCGACGAAGAAAACACCCGTTT
TCGCCATACTTCGACGACCACCTCGGTACGCGCTTTCAATAACCAGATGGCCTGGCTGCGCGACAGGGGATACGCGACAC
TGAGCATGGCGCAGCTGGAAGGTTACGTGAAGAATAAGATCAATCTCCCTGCGCGAGCGGTGGTAATTACCTTTGATGAT
GGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTGTTGAAACAATATGGTATGAAGGCGACGGCGTTTATTGTTACCTC
GCGCATCAAACGTCACCCGCAGAAATGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAACTTAACGAAATTCGCG
ATGTATTTGATTTCCAGTCACATACTCATTTTTTGCATCGGATAGATGGTTATCGGCGGCCTATATTGCTGAGCCGTAGT
GAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCACATGTTTTGTATCTTTCTTA
TCCATTTGGCGGATTTAATGACAAAGCTGTGAAGGCAGCAAAAGAAGCCGGATTTCACCTGGCGGTGACGACCATGAAAG
GCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCG
CGGCTGGTGAGTAACCAGCCGCAGGGATAA

Upstream 100 bases:

>100_bases
GCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAACCCGCGATTCTGATGACGCTTTTGCTACAATAAAAGCGTTGTT
TCACCCTCGGTTATTTTTTC

Downstream 100 bases:

>100_bases
CAATCAGGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCGTTGTCGCCTTCAAAATAGGCGACGTTGGGTC
GCCAGGTGCGAGCTTCTTCA

Product: putative exported polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYKQAVILLLMLFTASVSAALPAHYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYVFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRIDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAAKEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG

Sequences:

>Translated_409_residues
MYKQAVILLLMLFTASVSAALPAHYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYVFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRIDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAAKEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG
>Mature_409_residues
MYKQAVILLLMLFTASVSAALPAHYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYVFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRIDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAAKEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=409, Percent_Identity=97.3105134474328, Blast_Score=828, Evalue=0.0,
Organism=Escherichia coli, GI1787260, Length=245, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46332; Mature: 46332

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQAVILLLMLFTASVSAALPAHYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCC
ASYYVFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECC
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRIDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
KEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
HHCCCEEEEEEEECCCCCCCCHHHEEEEHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MYKQAVILLLMLFTASVSAALPAHYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCC
ASYYVFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECC
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRIDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
KEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG
HHCCCEEEEEEEECCCCCCCCHHHEEEEHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]