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The map label for this gene is yfeN [H]

Identifier: 218687892

GI number: 218687892

Start: 15930

End: 16691

Strand: Direct

Name: yfeN [H]

Synonym: ECED1_0015

Alternate gene names: 218687892

Gene position: 15930-16691 (Clockwise)

Preceding gene: 218687891

Following gene: 218687893

Centisome position: 0.31

GC content: 39.9

Gene sequence:

>762_bases
ATGTCTGCCAAAAGACGACTTCTTATTGCGTGTACCTTGATAACAGCTATCTATCATTTTCCTGCATATTCTTCATTAGA
ATATAAAGGAACCTTTGGTTCAATAAATGCGGGTTATGCAGACTGGAATAGTGGATTTGTAAACACTCACCGTGGTGAAG
TATGGAAAGTGACTGCGGATTTTGGGGTAAATTTTAAAGAAGCAGAATTTTACTCATTTTATGAAAGTAATGTACTCAAT
CATGCTGTAGCAGGGAGAAATCATACGGTTTCAGCAATGACGCATGTCAGACTCTTTGACTCTGATATGACATTCTTTGG
CAAAATTTATGGCCAATGGGATAACTCATGGGGTGACGATCTGGACATGTTTTATGGATTCGGTTACCTCGGCTGGAACG
GCGAGTGGGGCTTTTTTAAACCGTATATTGGATTGCATAATCAATCTGGTGACTACGTATCAGCTAAATATGGTCAAACG
AATGGTTGGAATGGTTATGTTGTTGGCTGGACAGCAGTATTACCATTTACGTTATTTGACGAAAAATTTGTTTTATCTAA
CTGGAATGAAATAGAACTGGACAGGAACGATGCTTACACGGAGCAGCAATTTGGCCGGAACGGGTTAAATGGCGGTTTAA
CTATTGCCTGGAAGTTCTATCCTCGCTGGAAAGCTAGTGTGACGTGGCGTTATTTCGATAATAAGCTGGGCTACGATGGC
TTTGGCGATCAAATGATTTATATGCTTGGTTATGATTTCTAA

Upstream 100 bases:

>100_bases
ATCTTTAAATATACTGGCCTGGTCATTCTTAATAAAAATGAATTGTCTGGTGTATTAATTCCTATGGAATCATAAAAACA
ATGAATGGAGAACATATTAT

Downstream 100 bases:

>100_bases
TTTTTATCAGGGAATAATTATGCAGAAAACGTTAATGGCCAGTTTGATCGGCCTTGCAGTTTGCACAGGGAATGCTTTTA
GTCCTGCCTTAGCCGCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSAKRRLLIACTLITAIYHFPAYSSLEYKGTFGSINAGYADWNSGFVNTHRGEVWKVTADFGVNFKEAEFYSFYESNVLN
HAVAGRNHTVSAMTHVRLFDSDMTFFGKIYGQWDNSWGDDLDMFYGFGYLGWNGEWGFFKPYIGLHNQSGDYVSAKYGQT
NGWNGYVVGWTAVLPFTLFDEKFVLSNWNEIELDRNDAYTEQQFGRNGLNGGLTIAWKFYPRWKASVTWRYFDNKLGYDG
FGDQMIYMLGYDF

Sequences:

>Translated_253_residues
MSAKRRLLIACTLITAIYHFPAYSSLEYKGTFGSINAGYADWNSGFVNTHRGEVWKVTADFGVNFKEAEFYSFYESNVLN
HAVAGRNHTVSAMTHVRLFDSDMTFFGKIYGQWDNSWGDDLDMFYGFGYLGWNGEWGFFKPYIGLHNQSGDYVSAKYGQT
NGWNGYVVGWTAVLPFTLFDEKFVLSNWNEIELDRNDAYTEQQFGRNGLNGGLTIAWKFYPRWKASVTWRYFDNKLGYDG
FGDQMIYMLGYDF
>Mature_252_residues
SAKRRLLIACTLITAIYHFPAYSSLEYKGTFGSINAGYADWNSGFVNTHRGEVWKVTADFGVNFKEAEFYSFYESNVLNH
AVAGRNHTVSAMTHVRLFDSDMTFFGKIYGQWDNSWGDDLDMFYGFGYLGWNGEWGFFKPYIGLHNQSGDYVSAKYGQTN
GWNGYVVGWTAVLPFTLFDEKFVLSNWNEIELDRNDAYTEQQFGRNGLNGGLTIAWKFYPRWKASVTWRYFDNKLGYDGF
GDQMIYMLGYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=247, Percent_Identity=29.9595141700405, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 29220; Mature: 29089

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKRRLLIACTLITAIYHFPAYSSLEYKGTFGSINAGYADWNSGFVNTHRGEVWKVTAD
CCCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEECC
FGVNFKEAEFYSFYESNVLNHAVAGRNHTVSAMTHVRLFDSDMTFFGKIYGQWDNSWGDD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCC
LDMFYGFGYLGWNGEWGFFKPYIGLHNQSGDYVSAKYGQTNGWNGYVVGWTAVLPFTLFD
CHHHHCCEEECCCCCCCEECCEEEEECCCCCEEEEECCCCCCCCCEEEEEHHEEEEEECC
EKFVLSNWNEIELDRNDAYTEQQFGRNGLNGGLTIAWKFYPRWKASVTWRYFDNKLGYDG
CEEEECCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
FGDQMIYMLGYDF
CCCCEEEEEECCC
>Mature Secondary Structure 
SAKRRLLIACTLITAIYHFPAYSSLEYKGTFGSINAGYADWNSGFVNTHRGEVWKVTAD
CCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCEEEEEECC
FGVNFKEAEFYSFYESNVLNHAVAGRNHTVSAMTHVRLFDSDMTFFGKIYGQWDNSWGDD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCC
LDMFYGFGYLGWNGEWGFFKPYIGLHNQSGDYVSAKYGQTNGWNGYVVGWTAVLPFTLFD
CHHHHCCEEECCCCCCCEECCEEEEECCCCCEEEEECCCCCCCCCEEEEEHHEEEEEECC
EKFVLSNWNEIELDRNDAYTEQQFGRNGLNGGLTIAWKFYPRWKASVTWRYFDNKLGYDG
CEEEECCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
FGDQMIYMLGYDF
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]