Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is atsA [H]
Identifier: 218687893
GI number: 218687893
Start: 16675
End: 18204
Strand: Direct
Name: atsA [H]
Synonym: ECED1_0016
Alternate gene names: 218687893
Gene position: 16675-18204 (Clockwise)
Preceding gene: 218687892
Following gene: 218687894
Centisome position: 0.32
GC content: 44.58
Gene sequence:
>1530_bases TTGGTTATGATTTCTAATTTTTATCAGGGAATAATTATGCAGAAAACGTTAATGGCCAGTTTGATCGGCCTTGCAGTTTG CACAGGGAATGCTTTTAGTCCTGCCTTAGCCGCAGAGGCTAAACAACCTAATTTAGTCATTATTATGGCGGATGATTTAG GTTATGGCGATTTAGCAACATATGGTCATCAGATCGTTAAAACACCTAATATCGACAGGCTTGCCCAGGAAGGGGTCAAA TTTACTGACTACTATGCCCCCGCTCCTTTAAGTTCACCTTCACGCGCAGGGCTATTAACCGGCCGGATGCCATTTCGTAC TGGAATTCGCTCATGGATTCCTTCAGGCAAAGATGTTGCCTTAGGGCGTAACGAACTCACGATTGCTAATCTACTCAAAG CGCAAGGGTACGACACGGCAATGATGGGTAAGCTGCATCTGAATGCAGGCGGCGATCGCACCGATCAGCCACAAGCACAA GATATGGGCTTTGATTACTCACTGGTTAATACGGCGGGCTTTGTTACCGACGCCACGCTGGATAACGCTAAAGAACGCCC GCGTTATGGCATGGTTTACCCGACAGGCTGGCTACGTAACGGGCAACCCACTCCACGAGCTGATAAAATGAGCGGTGAGT ATGTCAGTTCGGAAGTCGTCAACTGGCTGGATAACAAAAAGGACAGCAAGCCTTTCTTCCTCTATGTTGCTTTTACCGAA GTGCATAGCCCCCTGGCTTCGCCCAAAAAATACCTCGACATGTACTCACAATATATGAGCGCGTATCAGAAGCAGCATCC TGATTTATTTTATGGCGACTGGGCAGACAAACCCTGGCGTGGTGTGGGGGAATATTATGCCAATATCAGCTATCTGGATG CACAGGTTGGAAAAGTGCTGGATAAAATCAAAGCGATGGGTGAAGAAGATAACACAATCGTTATTTTTACCAGTGATAAC GGTCCGGTAACGCGTGAAGCGCGCAAAGTGTATGAGCTGAATTTGGCAGGGGAAACGGATGGATTACGCGGTCGCAAGGA TAACCTTTGGGAAGGCGGAATTCGTGTTCCAGCCATTATTAAATATGGTAAACATCTACCACAGGGAATGGTTTCAGATA CACCCGTTTATGGTCTGGACTGGATGCCTACTTTAGCGAAAATGATGAACTTCAAATTACCTACAGACCGTACTTTCGAT GGTGAATCGCTGGTTCCTGTTCTTGAGCAAAAAGCATTGAAACGCGAAAAGCCATTAATTTTCGGGATTGATATGCCATT CCAGGATGATCCAACCGATGAATGGGCGATCCGTGATGGTGACTGGAAGATGATTATCGATCGCAATAATAAACCGAAAT ATCTCTACAATCTGAAATCTGATCGTTATGAAACACTTAATCTGAACGGTAAAAAAACAGATATTGAAAAACAGATGTAT GGTAAGTTTTTAAAATATAAAACTGATATTGATAATGATTCTCTAATGAAAGCCAGAGGTGATAAACCAGAAGTGGTGAC CTGGGGCTAA
Upstream 100 bases:
>100_bases GCCTGGAAGTTCTATCCTCGCTGGAAAGCTAGTGTGACGTGGCGTTATTTCGATAATAAGCTGGGCTACGATGGCTTTGG CGATCAAATGATTTATATGC
Downstream 100 bases:
>100_bases CCTGATAATCATAATAAATGTAATGTATGCCATTTAGGGCTATGCCCGCCTGATTCAGTGCTACGCATTGAATCAGGTTC TTTTCGCGTTGAACAATATC
Product: putative Cerebroside-sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MVMISNFYQGIIMQKTLMASLIGLAVCTGNAFSPALAAEAKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVK FTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQ DMGFDYSLVNTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTE VHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDN GPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFD GESLVPVLEQKALKREKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLNGKKTDIEKQMY GKFLKYKTDIDNDSLMKARGDKPEVVTWG
Sequences:
>Translated_509_residues MVMISNFYQGIIMQKTLMASLIGLAVCTGNAFSPALAAEAKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVK FTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQ DMGFDYSLVNTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTE VHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDN GPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFD GESLVPVLEQKALKREKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLNGKKTDIEKQMY GKFLKYKTDIDNDSLMKARGDKPEVVTWG >Mature_509_residues MVMISNFYQGIIMQKTLMASLIGLAVCTGNAFSPALAAEAKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVK FTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQ DMGFDYSLVNTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTE VHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDN GPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFD GESLVPVLEQKALKREKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLNGKKTDIEKQMY GKFLKYKTDIDNDSLMKARGDKPEVVTWG
Specific function: Plays an important role in the mineralization of sulfates [H]
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI146229331, Length=466, Percent_Identity=31.5450643776824, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI146229329, Length=466, Percent_Identity=31.5450643776824, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI6005990, Length=466, Percent_Identity=31.5450643776824, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI146229324, Length=466, Percent_Identity=31.5450643776824, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI53831991, Length=455, Percent_Identity=30.1098901098901, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI58743319, Length=446, Percent_Identity=29.5964125560538, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI71852584, Length=432, Percent_Identity=31.25, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI109389362, Length=427, Percent_Identity=28.3372365339578, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI59797060, Length=488, Percent_Identity=26.4344262295082, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI38569407, Length=405, Percent_Identity=30.1234567901235, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI38569405, Length=444, Percent_Identity=28.8288288288288, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI4503899, Length=401, Percent_Identity=27.930174563591, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI45430057, Length=396, Percent_Identity=29.040404040404, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI157266309, Length=444, Percent_Identity=26.3513513513513, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI71852586, Length=139, Percent_Identity=44.6043165467626, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI31742482, Length=153, Percent_Identity=43.7908496732026, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI146229327, Length=392, Percent_Identity=27.0408163265306, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI5360208, Length=339, Percent_Identity=27.1386430678466, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI4557659, Length=335, Percent_Identity=27.1641791044776, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI39930577, Length=474, Percent_Identity=23.4177215189873, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI87081924, Length=531, Percent_Identity=25.2354048964218, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790112, Length=493, Percent_Identity=25.9634888438134, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1790233, Length=371, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17559078, Length=242, Percent_Identity=35.1239669421488, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI115533416, Length=424, Percent_Identity=24.2924528301887, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI115533418, Length=415, Percent_Identity=24.0963855421687, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24666109, Length=422, Percent_Identity=29.6208530805687, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24666175, Length=427, Percent_Identity=27.8688524590164, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI281366397, Length=451, Percent_Identity=28.6031042128603, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI281366395, Length=451, Percent_Identity=28.6031042128603, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24666163, Length=451, Percent_Identity=28.6031042128603, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI281363223, Length=425, Percent_Identity=28, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI21356831, Length=405, Percent_Identity=24.1975308641975, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24647401, Length=449, Percent_Identity=23.6080178173719, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 57270; Mature: 57270
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMISNFYQGIIMQKTLMASLIGLAVCTGNAFSPALAAEAKQPNLVIIMADDLGYGDLAT CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHH YGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVA HCCCEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCEE LGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLVNTAGFVTDATL CCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHCCCCEEECCCCCCEEECHH DNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTE CCHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHH VHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVL HHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH DKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAII HHHHHCCCCCCEEEEEECCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH KYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREKPLI HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE FGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLNGKKTDIEKQMY EEECCCCCCCCCCCCEEECCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCHHHHHHH GKFLKYKTDIDNDSLMKARGDKPEVVTWG HHHHHEECCCCCCCHHHCCCCCCCEEECC >Mature Secondary Structure MVMISNFYQGIIMQKTLMASLIGLAVCTGNAFSPALAAEAKQPNLVIIMADDLGYGDLAT CEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHH YGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVA HCCCEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCEE LGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLVNTAGFVTDATL CCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHCCCCEEECCCCCCEEECHH DNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTE CCHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHH VHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVL HHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH DKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAII HHHHHCCCCCCEEEEEECCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH KYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREKPLI HHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE FGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLNGKKTDIEKQMY EEECCCCCCCCCCCCEEECCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCHHHHHHH GKFLKYKTDIDNDSLMKARGDKPEVVTWG HHHHHEECCCCCCCHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10336424 [H]