Click here to switch to the map view.

The map label for this gene is yhhS [C]

Identifier: 218550736

GI number: 218550736

Start: 3514304

End: 3515551

Strand: Reverse

Name: yhhS [C]

Synonym: EFER_3447

Alternate gene names: 218550736

Gene position: 3515551-3514304 (Counterclockwise)

Preceding gene: 218550766

Following gene: 218550733

Centisome position: 76.61

GC content: 53.53

Gene sequence:

>1248_bases
ATGTTAAAAATGAAACTCTGTTCTAAATACGGGGTAATCGTGATGCCCGAGCCCGCACTTAATGGTCTGCGTCTGAATCT
GCGCATTGTTTCAATTGTCATGTTTAACTTCGCCAGCTATCTCACTATCGGTTTACCGCTCGCGGTATTACCTGGCTATG
TCCATGATGTGATGGGATTTAGCGCCTTCTGGGCGGGGTTGGTGATCAGCCTGCAATACTTCGCCACTTTGCTCAGTCGT
CCACATGCCGGGCGGTATGCAGATCTATTAGGCCCCAAAAAGATTGTGATGTTTGGGCTGGCTGGCTGTTTGCTCAGTGG
TGGGGCCTATTTTCTGGCGGGGAGTGCCAGCAGCTGGCCGGTACTCAGCTTGTTACTGTTGTGTCTTGGGCGTGTGATTC
TGGGAATTGGACAAAGCTTTACCGGCACTGGTTCTACTTTGTGGGGCGTCGGTGCGGTGGGATCGACTCACATTGGTCGG
GTGATTTCGTGGAACGGCATCGTCACGTATGGTGCGATGGCGATGGGCGCACCGCTTGGTGTTCTGTGCTATCACTGGGT
TGGGCTACAAGGACTTTCACTTTTTATTATGGCGGTTGCCCTGGTGGCACTGCTGCTGGCGATCCCACGTCCAGCGGTGA
AAGCGAGCAAAGGGAAGCCGCTACCGTTTCGTGCAGTACTGGGGCGAGTCTGGCTTTATGGGATGGCGCTGGCAATGGCG
TCTGCCGGGTTTGGCGTTATCGCCACCTTTATCACGCTGTTTTATGACGCGAAAGGTTGGGACGGAGCGGCCTTCGCACT
GACGCTATTTAGCTGTGCGTTTGTCGGTACACGATTGTTATTCCCTGGCGGCATTAACCGTATCGGCGGCTTAAACGTAG
CGATGATTTGCTTTAGTGTTGAGATAATCGGCTTGCTACTGGTCGGGGTTGCGATGGTACCCTGGATGGCGAAAGTGGGC
GTTTTGCTGGCAGGTGCGGGTTTTTCGTTGGTCTTTCCGGCGTTGGGCGTTGTGGCAGTAAAAGCAGTGCCACAGCAAAA
TCAGGGGGCGGCTCTGGCGACTTATACCGTCTTTATGGATTTATCTCTTGGTATTACCGGACCGTTAGCCGGGTTGGTCA
TGAGCTGGGCAGGTGTATCCGTGATTTATCTGGCTGCGGCGGGGCTGGTGGTTATTGCATTACTACTAACATGGCGGTTA
AAAAAACGGCCTCCGCAACCACTGTCGGAGACCGCTTCATCATCGTAG

Upstream 100 bases:

>100_bases
GAGGTTTCCATCGGTGATTTCCTGTGACTTTTTGTATTAAGTGTAGTGGTACTCTCCGGGGCAATAATCTGATTCTTCCT
GCTGATTTTCACACCATTGC

Downstream 100 bases:

>100_bases
TCGTTACTTAATTTCCAGAGTGTTAATGATGCTTTCCGCTGCGGTTTGCGCTTTTTGTTGATCGTCCGCTGGCAACGTAA
TTTGCATGGTCAACAATTGC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLKMKLCSKYGVIVMPEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSR
PHAGRYADLLGPKKIVMFGLAGCLLSGGAYFLAGSASSWPVLSLLLLCLGRVILGIGQSFTGTGSTLWGVGAVGSTHIGR
VISWNGIVTYGAMAMGAPLGVLCYHWVGLQGLSLFIMAVALVALLLAIPRPAVKASKGKPLPFRAVLGRVWLYGMALAMA
SAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPGGINRIGGLNVAMICFSVEIIGLLLVGVAMVPWMAKVG
VLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGITGPLAGLVMSWAGVSVIYLAAAGLVVIALLLTWRL
KKRPPQPLSETASSS

Sequences:

>Translated_415_residues
MLKMKLCSKYGVIVMPEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSR
PHAGRYADLLGPKKIVMFGLAGCLLSGGAYFLAGSASSWPVLSLLLLCLGRVILGIGQSFTGTGSTLWGVGAVGSTHIGR
VISWNGIVTYGAMAMGAPLGVLCYHWVGLQGLSLFIMAVALVALLLAIPRPAVKASKGKPLPFRAVLGRVWLYGMALAMA
SAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPGGINRIGGLNVAMICFSVEIIGLLLVGVAMVPWMAKVG
VLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGITGPLAGLVMSWAGVSVIYLAAAGLVVIALLLTWRL
KKRPPQPLSETASSS
>Mature_415_residues
MLKMKLCSKYGVIVMPEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSR
PHAGRYADLLGPKKIVMFGLAGCLLSGGAYFLAGSASSWPVLSLLLLCLGRVILGIGQSFTGTGSTLWGVGAVGSTHIGR
VISWNGIVTYGAMAMGAPLGVLCYHWVGLQGLSLFIMAVALVALLLAIPRPAVKASKGKPLPFRAVLGRVWLYGMALAMA
SAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPGGINRIGGLNVAMICFSVEIIGLLLVGVAMVPWMAKVG
VLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGITGPLAGLVMSWAGVSVIYLAAAGLVVIALLLTWRL
KKRPPQPLSETASSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=399, Percent_Identity=90.4761904761905, Blast_Score=697, Evalue=0.0,
Organism=Escherichia coli, GI1788662, Length=372, Percent_Identity=41.1290322580645, Blast_Score=228, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43376; Mature: 43376

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKMKLCSKYGVIVMPEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGF
CCCHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVMFGLAGCLLSGGAYFLAGSASSWP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCH
VLSLLLLCLGRVILGIGQSFTGTGSTLWGVGAVGSTHIGRVISWNGIVTYGAMAMGAPLG
HHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHCCCEEECCCHHHHHHHHHCCHHH
VLCYHWVGLQGLSLFIMAVALVALLLAIPRPAVKASKGKPLPFRAVLGRVWLYGMALAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPGGINRIGGLNVAMICFSV
HCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EIIGLLLVGVAMVPWMAKVGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHEEEEHH
LSLGITGPLAGLVMSWAGVSVIYLAAAGLVVIALLLTWRLKKRPPQPLSETASSS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure
MLKMKLCSKYGVIVMPEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGF
CCCHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVMFGLAGCLLSGGAYFLAGSASSWP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCH
VLSLLLLCLGRVILGIGQSFTGTGSTLWGVGAVGSTHIGRVISWNGIVTYGAMAMGAPLG
HHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHCCCEEECCCHHHHHHHHHCCHHH
VLCYHWVGLQGLSLFIMAVALVALLLAIPRPAVKASKGKPLPFRAVLGRVWLYGMALAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPGGINRIGGLNVAMICFSV
HCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EIIGLLLVGVAMVPWMAKVGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHEEEEHH
LSLGITGPLAGLVMSWAGVSVIYLAAAGLVVIALLLTWRLKKRPPQPLSETASSS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA