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The map label for this gene is yhhJ [H]

Identifier: 218550766

GI number: 218550766

Start: 3540152

End: 3541276

Strand: Reverse

Name: yhhJ [H]

Synonym: EFER_3477

Alternate gene names: 218550766

Gene position: 3541276-3540152 (Counterclockwise)

Preceding gene: 218550767

Following gene: 218550736

Centisome position: 77.17

GC content: 54.49

Gene sequence:

>1125_bases
ATGCGCCATTTACGCAATATTTTTAATCTGGGTATCAAAGAGTTGCGCAGTCTGCTTGGTGATAAAGCGATGCTGACGCT
GATTATTTTCTCGTTTACGGTGTCGGTTTATTCATCAGCGACCGTCACGCCAGGATCGTTGAACCTGGCACCGATCGCTA
TTGCCGATATGGATCAATCGCAGTTATCGAACCGGATCGTTAACAGCTTCTACCGCCCGTGGTTTTTGCCCCCGGAGATG
ATCACCGCCGATGAGATGGATGCCGGGCTGGACGCCGGGCGCTATACCTTCGCGATAAATATTCCGCCTAATTTTCAGCG
TGATGTCCTCGCAGGACGCCAGCCGGATATTCAGGTGAACGTCGATGCCACGCGCATGAGCCAGGCATTCACTGGCAACG
GTTATATCCAGAATATTATCAACGGTGAAGTGAACAGCTTTGTCGCGCGCTACCGTGATAACAGCGAACCGTTGGTATCG
CTGGAAACCCGCATGCGCTTTAATCCGAACCTCGATCCCGCGTGGTTTGGCGGGGTGATGGCGATCATCAACAACATTAC
CATGCTGGCGATTGTACTGACCGGATCGGCGCTGATCCGCGAGCGTGAACACGGCACGGTGGAACACTTACTGGTGATGC
CGATAAAGCCGTTTGAGATCATGATGGCGAAGGTCTGGTCGATGGGGCTGGTGGTGCTGGTGGTATCGGGATTATCGCTG
GTGCTGATGGTAAAAGGCGTGCTGGGCGTACCGATTGAAGGCTCGATCCCGCTGTTTATGCTTGGCGTGGCGCTCAGTCT
GTTTGCCACCACGTCAATCGGCATTTTTATGGGGACGATAGCGCGTTCAATGCCGCAACTGGGGCTGCTTGTGATTCTGG
TGCTGCTGCCGCTGCAAATGCTTTCCGGTGGCTCCACGCCGCGCGAAAGTATGCCGCAGATGGTGCAGGACATTATGCTG
ACCATGCCGACGACACACTTTGTTAGCCTTGCGCAGGCCATCCTCTACCGGGGTGCCGGATTCGAAATCGTCTGGCCGCA
GTTCCTGACGTTGATGGCAATTGGCGGCGCGTTTTTCACCATCGCGTTGCTGCGATTCAGGAAGACGATTGGGACAATGG
CGTAA

Upstream 100 bases:

>100_bases
TGGATCTGACGGATTTATGGCAACTTTTTATCCCGTTGCTGATAGCCATTCCACTGGTGATGGGCTTAAGCATCCTGCTG
CTGAAAAAACAGGAGGGATG

Downstream 100 bases:

>100_bases
ATACAGTTGCCCGATGCGTAAGCTTATAGGGTCTACGCATCGGTACAATTTATTGAATTGTAGTTGTTTTACGCCGCATC
CGGCGAGGATTTATTTAACC

Product: ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRHLRNIFNLGIKELRSLLGDKAMLTLIIFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEM
ITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPIKPFEIMMAKVWSMGLVVLVVSGLSL
VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIML
TMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA

Sequences:

>Translated_374_residues
MRHLRNIFNLGIKELRSLLGDKAMLTLIIFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEM
ITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPIKPFEIMMAKVWSMGLVVLVVSGLSL
VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIML
TMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA
>Mature_374_residues
MRHLRNIFNLGIKELRSLLGDKAMLTLIIFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEM
ITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPIKPFEIMMAKVWSMGLVVLVVSGLSL
VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIML
TMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=99.1978609625668, Blast_Score=747, Evalue=0.0,
Organism=Escherichia coli, GI1787010, Length=374, Percent_Identity=24.331550802139, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI48994943, Length=332, Percent_Identity=27.4096385542169, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787011, Length=353, Percent_Identity=25.7790368271955, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41089; Mature: 41089

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLRNIFNLGIKELRSLLGDKAMLTLIIFSFTVSVYSSATVTPGSLNLAPIAIADMDQS
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHH
QLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVN
HHHHHHHHHHCCCCCCCCHHCCHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
VDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVM
CCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHH
AIINNITMLAIVLTGSALIREREHGTVEHLLVMPIKPFEIMMAKVWSMGLVVLVVSGLSL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQM
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFT
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
IALLRFRKTIGTMA
HHHHHHHHHHCCCC
>Mature Secondary Structure
MRHLRNIFNLGIKELRSLLGDKAMLTLIIFSFTVSVYSSATVTPGSLNLAPIAIADMDQS
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHH
QLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVN
HHHHHHHHHHCCCCCCCCHHCCHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
VDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVM
CCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHH
AIINNITMLAIVLTGSALIREREHGTVEHLLVMPIKPFEIMMAKVWSMGLVVLVVSGLSL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQM
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFT
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
IALLRFRKTIGTMA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]