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The map label for this gene is aufA [H]

Identifier: 218550693

GI number: 218550693

Start: 3468519

End: 3469223

Strand: Reverse

Name: aufA [H]

Synonym: EFER_3404

Alternate gene names: 218550693

Gene position: 3469223-3468519 (Counterclockwise)

Preceding gene: 218550694

Following gene: 218550692

Centisome position: 75.6

GC content: 46.24

Gene sequence:

>705_bases
ATGAAATTTCATTTATCTAATTTATCTGTAGCTTTACTGGCATCAGGTATGCTGATGTCAACAGCGGTAATCGCTGCGCC
AGGCGATGCATCAAAATTTGGTGGCGCGGATACAGACTGGAGTACCGTTGATTATCCAAAACTTACCGATATGGATAGCA
ACACCGATGCGATGGGCGGAAACATCCGCTTTACGGGGCGTGTGGTTAAAGCGACATGCAAGGTTGCTACAGAATCGAAA
CAGATTGAAGTGGTACTGCCAGTCGTACCTTCTAACGCTTTCACAGGCATTGATACCGAGGCAACGGGAGCCAGTAACCA
GACTGACTTCAACATTAAACTGACCGATTGTAGCAATACGGACAGTCAAAATATTGAATTTCGTTTTACTGGCGTAGCAG
ACAGTGCTAATCAGACGCTTGCCAATGAAGTTGAAGGAGACACTGATGCTGATGGTAATGGCGAAGCAGGTGCAACAGGT
GTAGGGATTCGTATTTATTCTAAAAACACGACAGCTGATGGTCTGATTAAACTGAATACACAAACTCCTCAGGGTAGTGG
TTCTTCGGCGGCTTACGTGATTCCCGGCGATGCAGTCAAACATGATTTTACTGCGGCATTTACTGCGGGCTATGCGCAGA
ACGGTAATACCGTTGCACCCGGTCTGGTTAAATCTACGGCAAGTTTCGTCGTGCTGTACGAATAA

Upstream 100 bases:

>100_bases
ACCAGTACCCATTTATTCTTTTTTGTATCGTAACCCATGATAGTTACATATGAAAAATTGCCTATATCACTTGGATTTTT
TAACAAAAGGAAAGGTATAA

Downstream 100 bases:

>100_bases
TTACGCAAGAAAATTTCAGGTTACAGTTATTTGTAGCCTGAAATTAATATTACGTGTTGAATTATAATAAATAGACACGT
ATCAGTAATTAAAATTAGTT

Product: Auf fimbriae major fimbrial subunit AufA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKFHLSNLSVALLASGMLMSTAVIAAPGDASKFGGADTDWSTVDYPKLTDMDSNTDAMGGNIRFTGRVVKATCKVATESK
QIEVVLPVVPSNAFTGIDTEATGASNQTDFNIKLTDCSNTDSQNIEFRFTGVADSANQTLANEVEGDTDADGNGEAGATG
VGIRIYSKNTTADGLIKLNTQTPQGSGSSAAYVIPGDAVKHDFTAAFTAGYAQNGNTVAPGLVKSTASFVVLYE

Sequences:

>Translated_234_residues
MKFHLSNLSVALLASGMLMSTAVIAAPGDASKFGGADTDWSTVDYPKLTDMDSNTDAMGGNIRFTGRVVKATCKVATESK
QIEVVLPVVPSNAFTGIDTEATGASNQTDFNIKLTDCSNTDSQNIEFRFTGVADSANQTLANEVEGDTDADGNGEAGATG
VGIRIYSKNTTADGLIKLNTQTPQGSGSSAAYVIPGDAVKHDFTAAFTAGYAQNGNTVAPGLVKSTASFVVLYE
>Mature_234_residues
MKFHLSNLSVALLASGMLMSTAVIAAPGDASKFGGADTDWSTVDYPKLTDMDSNTDAMGGNIRFTGRVVKATCKVATESK
QIEVVLPVVPSNAFTGIDTEATGASNQTDFNIKLTDCSNTDSQNIEFRFTGVADSANQTLANEVEGDTDADGNGEAGATG
VGIRIYSKNTTADGLIKLNTQTPQGSGSSAAYVIPGDAVKHDFTAAFTAGYAQNGNTVAPGLVKSTASFVVLYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 24199; Mature: 24199

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFHLSNLSVALLASGMLMSTAVIAAPGDASKFGGADTDWSTVDYPKLTDMDSNTDAMGG
CEEECCCCEEEHHHCCHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIRFTGRVVKATCKVATESKQIEVVLPVVPSNAFTGIDTEATGASNQTDFNIKLTDCSNT
EEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
DSQNIEFRFTGVADSANQTLANEVEGDTDADGNGEAGATGVGIRIYSKNTTADGLIKLNT
CCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEC
QTPQGSGSSAAYVIPGDAVKHDFTAAFTAGYAQNGNTVAPGLVKSTASFVVLYE
CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEECCCHHCCCEEEEEEEC
>Mature Secondary Structure
MKFHLSNLSVALLASGMLMSTAVIAAPGDASKFGGADTDWSTVDYPKLTDMDSNTDAMGG
CEEECCCCEEEHHHCCHHHEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIRFTGRVVKATCKVATESKQIEVVLPVVPSNAFTGIDTEATGASNQTDFNIKLTDCSNT
EEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
DSQNIEFRFTGVADSANQTLANEVEGDTDADGNGEAGATGVGIRIYSKNTTADGLIKLNT
CCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEC
QTPQGSGSSAAYVIPGDAVKHDFTAAFTAGYAQNGNTVAPGLVKSTASFVVLYE
CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEECCCHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721701; 11677609 [H]