Click here to switch to the map view.

The map label for this gene is yhfY [H]

Identifier: 218550638

GI number: 218550638

Start: 3405524

End: 3405886

Strand: Reverse

Name: yhfY [H]

Synonym: EFER_3348

Alternate gene names: 218550638

Gene position: 3405886-3405524 (Counterclockwise)

Preceding gene: 218550639

Following gene: 218550637

Centisome position: 74.22

GC content: 50.96

Gene sequence:

>363_bases
ATGGAAACCAGACTCAACCTGCTTTGTGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGTTGCAGGTCGTCAA
CGTACTGGAAACAGAGTGCCATCTACCGGTGCGCAGCGAGCAAGGAATGATGGCGATGACACATATGGCGAGCGCACTGA
TGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAATTGCTGGCAGAGCTGGCGCAATCCAGCCACTGGTCA
GCCATTTTACAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAACCCGTGTGAAGAAGGCTATTTGCTGGC
CAACCTTTATGGATTATGGATGGCCGCTAACGAAGAGGTCTGA

Upstream 100 bases:

>100_bases
CTGCTGCGTGCAGTTGTTGATAAACATGCCCTGCTTGCTCATCAACAGCGAGTAGTCAGTGGGGAACAGGAACCCAGTTA
TTAAACGAAAGGCATCTGAA

Downstream 100 bases:

>100_bases
ATCTCCCGGCAAATCCACGTCGCGTATCTTAAATATTCAAAAAAATGAATATTTAATTCAAGGAACAGAAACGAGGCAAC
AAGATGTTTGTAGAAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
METRLNLLCEAGVIDKDICKGMLQVVNVLETECHLPVRSEQGMMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWS
AILQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV

Sequences:

>Translated_120_residues
METRLNLLCEAGVIDKDICKGMLQVVNVLETECHLPVRSEQGMMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWS
AILQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
>Mature_120_residues
METRLNLLCEAGVIDKDICKGMLQVVNVLETECHLPVRSEQGMMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWS
AILQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PRD domain [H]

Homologues:

Organism=Escherichia coli, GI87082254, Length=120, Percent_Identity=95.8333333333333, Blast_Score=237, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 13527; Mature: 13527

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRLNLLCEAGVIDKDICKGMLQVVNVLETECHLPVRSEQGMMAMTHMASALMRSRRGE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EIEPLDNELLAELAQSSHWSAILQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METRLNLLCEAGVIDKDICKGMLQVVNVLETECHLPVRSEQGMMAMTHMASALMRSRRGE
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
EIEPLDNELLAELAQSSHWSAILQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]