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The map label for this gene is 218549306

Identifier: 218549306

GI number: 218549306

Start: 2018792

End: 2019601

Strand: Reverse

Name: 218549306

Synonym: EFER_1968

Alternate gene names: NA

Gene position: 2019601-2018792 (Counterclockwise)

Preceding gene: 218549307

Following gene: 218549305

Centisome position: 44.01

GC content: 52.59

Gene sequence:

>810_bases
ATGAGTGAACAGGCTGCCCTGTTACCTGAAAATAGCGACACTCCGGTGGTGGAAAAGAGGCCGCTGGTGGCGCCTGATAT
TTTTCAGGAGGAGATCTCCTGTCGCCAGTATCGTCTTCCCCTGCGAGGCAACAGCCTGAATCCAATGATCGATGCCGCCA
CGCCGCTGCTGGGGATGGTGATGCGCCTGACAACCATGAACAGCCAGACGATGCCGGATCACCTGTTCAGCCAGGTGGTC
ACCGATGTGCAGGCAGTAGAGCAATTACTCCAGGAGCAGGGTTATGAGCCCGGCATCATTGTCTCGTTCCGTTACATCCT
CTGCACTTTTATTGATGAAGCCGCGCTGGGGAATGGCTGGTCAAATAAAAACGAGTGGATCAAACAGTCGTTGCTGGTGC
ATTTCCATAACGAAGCCTGGGGCGGTGAGAAAGTCTTCATTCTGCTGGAACGCCTGTTGCGTGAACCGAAGCGTTATCAG
GATTTACTCGAATTCCTTTATATCTGTTTTTCTCTGGGCTTTCGCGGGCGCTATAAGGTTGCGGTACAGAACCCGGATGA
ATTTGAACAAATCTACCGTCGTCTGCATCACGTGCTGCACAAACTGCGTGGCGATGCTCCCTTTCCGCTGCTGCATCAGG
ACAAAAAAACACAAGGTGGACGCTACCAGTTGATGCAACGTCTGACCATCAGGCACCTCTTTTTGGGGGGAGTGGTGGTG
CTGGCGCTGTTTTATCTGTTTTACCTGCTCCGCCTGGACAGTCAGACACAGGATATTCTTCACCAGTTAAACCGGCTGCT
TGCCAGGTAA

Upstream 100 bases:

>100_bases
GCCTGGCAGGACGTGGTGAAAGCCGGTGCGCTGTCACTGCATATTTCCGGCACCTTCCCGGAGCTGGACATGCAACTGTG
GGCGATAAGGGGCCAGGCTC

Downstream 100 bases:

>100_bases
GGATACATATGATTCAGATTGATTTAGCTGCACTGGTTAAGCGCCTTAACCCGTTCACCAAACAGGCGCTGGAAATGGCG
GCTTCAGAATGCATGAGCCA

Product: membrane protein Aec26

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; Type IV / VI Secretion System Protein; Type VI Secretion System OmpA/MotB Family Protein; DotU Family Type IV/VI Secretion System Protein; Type IV/VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Core Protein; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; Ompa/Motb Domain Protein; DotU Family Type IV / VI Secretion System Protein; OmpA/MotB Domain Protein; Type VI Secretion System Protein ImpK; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA-Family Protein; Type VI Secretion; Outer Membrane Protein Ompa/Motb Family; OmpA-Like Porin; T6ss U; OmpA/MotB; Flagellar Motor Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSEQAALLPENSDTPVVEKRPLVAPDIFQEEISCRQYRLPLRGNSLNPMIDAATPLLGMVMRLTTMNSQTMPDHLFSQVV
TDVQAVEQLLQEQGYEPGIIVSFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLLREPKRYQ
DLLEFLYICFSLGFRGRYKVAVQNPDEFEQIYRRLHHVLHKLRGDAPFPLLHQDKKTQGGRYQLMQRLTIRHLFLGGVVV
LALFYLFYLLRLDSQTQDILHQLNRLLAR

Sequences:

>Translated_269_residues
MSEQAALLPENSDTPVVEKRPLVAPDIFQEEISCRQYRLPLRGNSLNPMIDAATPLLGMVMRLTTMNSQTMPDHLFSQVV
TDVQAVEQLLQEQGYEPGIIVSFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLLREPKRYQ
DLLEFLYICFSLGFRGRYKVAVQNPDEFEQIYRRLHHVLHKLRGDAPFPLLHQDKKTQGGRYQLMQRLTIRHLFLGGVVV
LALFYLFYLLRLDSQTQDILHQLNRLLAR
>Mature_268_residues
SEQAALLPENSDTPVVEKRPLVAPDIFQEEISCRQYRLPLRGNSLNPMIDAATPLLGMVMRLTTMNSQTMPDHLFSQVVT
DVQAVEQLLQEQGYEPGIIVSFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHFHNEAWGGEKVFILLERLLREPKRYQD
LLEFLYICFSLGFRGRYKVAVQNPDEFEQIYRRLHHVLHKLRGDAPFPLLHQDKKTQGGRYQLMQRLTIRHLFLGGVVVL
ALFYLFYLLRLDSQTQDILHQLNRLLAR

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31322; Mature: 31191

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEQAALLPENSDTPVVEKRPLVAPDIFQEEISCRQYRLPLRGNSLNPMIDAATPLLGMV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
MRLTTMNSQTMPDHLFSQVVTDVQAVEQLLQEQGYEPGIIVSFRYILCTFIDEAALGNGW
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SNKNEWIKQSLLVHFHNEAWGGEKVFILLERLLREPKRYQDLLEFLYICFSLGFRGRYKV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEE
AVQNPDEFEQIYRRLHHVLHKLRGDAPFPLLHQDKKTQGGRYQLMQRLTIRHLFLGGVVV
EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LALFYLFYLLRLDSQTQDILHQLNRLLAR
HHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA