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The map label for this gene is 218549307

Identifier: 218549307

GI number: 218549307

Start: 2019594

End: 2021051

Strand: Reverse

Name: 218549307

Synonym: EFER_1969

Alternate gene names: NA

Gene position: 2021051-2019594 (Counterclockwise)

Preceding gene: 218549308

Following gene: 218549306

Centisome position: 44.04

GC content: 51.51

Gene sequence:

>1458_bases
GTGGAAACAGATAGAGCCGGTGGATGGCGTCGGCCACAACTACCGCCTGCTGGTACATGTACGACAGGGCAGTATCGAAA
TGAAAAAAGAGGACAACTGATAATGGCGACCATTAAAAATAAGGTGATCTGGCAGGAGGGGCTATTTGTTCAGCCACAGC
ATTTTCAGCAACAGCAACGTTATAACGATTATATCCTTGGTAATCGCCTGAATGCTCAGAGTGACTTTTTCTGGGGATTC
ACCCGGTTGTCTCTCAATATCGACTTATTGAGCCAGGGTAAAATTCATATTGATCATGCTGAAGGCTGTATGCCGGACGG
CACGGTTTTCAGCATTCCTGATCAGGATTTACTGCCAGAGCCATTAGAACCAAAGGTACTGAATACACCTGAAAGCCACA
TCATTTATCTGGCCTTGCCCGTTATTAGTGATGTTATTAATGAAGTGGATGGCCACCACAGCGCCGGGCAGAGTTCCCGA
CGTTATCGTCTTAACTATGCCGATGTACGCGATTTACACACCGATGAAGGGGATGTCAGGCAACTGTTGCTGGCGCAGCT
TACCCCCAGGATTGTCGGCGGTGGTGAGGATCGGAGCGGTATGGTCACGCTGCCTTTGTGCCGTATCCGCGATAGGTTGG
CTAATGGCGCACTGGTGCTGGATGAAAACTTTATTCCCACCTGCCAGTCTGTTCGCGTTAGCAACACGCTGGGTCGGTTT
GCCGGAGAGATTCAGGGGCTGGTCGCCAGCCGGGCAATTGAACTGGCAAGTCGTATTGGTTCGCCGGAACAAAGCGGCAT
TGCCGATGTGGCCGAGTTTATGATGTTGCAGATCCTCAACCGTAACCAGATGCACTTCACTCACCGCTCACACCTGCACA
CCCTGCATCCGGAGGATTTTTATCTGGATCTGGTGAAATTACTGGGCGAACTGATGACTTTCACTGAGAACAGTCGTTTG
CCCTGTCCTGTGGAGCCTTACGATCACCACGATCTCACCTTGTCGTTTAATACAGTGATCCCGGAATTACGCAGGACGCT
TAATATCGTGCTGATGCCACGGGCTCAAAACCTGCCATTGCGCTTTATGGACGGAATTTATACCGCCACTGTTAACGATC
CGACGTTGTTGCAGTCTGCTTCCTTTGTGCTGGCTGTCCGGGCGCGAATGCCGCATAACCAGATTATTCTCCAGTTTACC
CAGCAGTCGAAAGTTGCCGCCAGCAATAAAATTCGCGATGTGGTCAGCGTACAGGTTCCGGGTATTCCGCTGGTTCCACG
GACCGCAGCACCGCGTCAGTTGCCATACCATGAAGGTTTTGTTTATTTCGACCTGGATAAAGGTGCATCAGCCTGGCAGG
ACGTGGTGAAAGCCGGTGCGCTGTCACTGCATATTTCCGGCACCTTCCCGGAGCTGGACATGCAACTGTGGGCGATAAGG
GGCCAGGCTCATGAGTGA

Upstream 100 bases:

>100_bases
TGCTGCCGGACACCATCAAAACCCTGCCGCCAGTGAAGCTGGATGAGAAAACGCAGTTTATTGGCGTTGTGGCCTATTTT
TCTGATGACCAGGCCACCGA

Downstream 100 bases:

>100_bases
ACAGGCTGCCCTGTTACCTGAAAATAGCGACACTCCGGTGGTGGAAAAGAGGCCGCTGGTGGCGCCTGATATTTTTCAGG
AGGAGATCTCCTGTCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQRYNDYILGNRLNAQSDFFWGF
TRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPEPLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSR
RYRLNYADVRDLHTDEGDVRQLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDFYLDLVKLLGELMTFTENSRL
PCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPLRFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFT
QQSKVAASNKIRDVVSVQVPGIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
GQAHE

Sequences:

>Translated_485_residues
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQRYNDYILGNRLNAQSDFFWGF
TRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPEPLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSR
RYRLNYADVRDLHTDEGDVRQLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDFYLDLVKLLGELMTFTENSRL
PCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPLRFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFT
QQSKVAASNKIRDVVSVQVPGIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
GQAHE
>Mature_485_residues
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQRYNDYILGNRLNAQSDFFWGF
TRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPEPLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSR
RYRLNYADVRDLHTDEGDVRQLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDFYLDLVKLLGELMTFTENSRL
PCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPLRFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFT
QQSKVAASNKIRDVVSVQVPGIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
GQAHE

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54549; Mature: 54549

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEECCHHHHHHHH
YNDYILGNRLNAQSDFFWGFTRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPE
CCCEEECCCCCCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCC
PLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSRRYRLNYADVRDLHTDEGDVR
CCCCCEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHCCCCCHHHH
QLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
HHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCHHHEEHHHHHHHH
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHH
YLDLVKLLGELMTFTENSRLPCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCEEEEEEECCCCCCH
RFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFTQQSKVAASNKIRDVVSVQVP
HHHCCEEEEECCCCHHHHHCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEEEEECC
GIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCEEEEEEC
GQAHE
CCCCC
>Mature Secondary Structure
METDRAGGWRRPQLPPAGTCTTGQYRNEKRGQLIMATIKNKVIWQEGLFVQPQHFQQQQR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEECCHHHHHHHH
YNDYILGNRLNAQSDFFWGFTRLSLNIDLLSQGKIHIDHAEGCMPDGTVFSIPDQDLLPE
CCCEEECCCCCCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCC
PLEPKVLNTPESHIIYLALPVISDVINEVDGHHSAGQSSRRYRLNYADVRDLHTDEGDVR
CCCCCEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHCCCCCHHHH
QLLLAQLTPRIVGGGEDRSGMVTLPLCRIRDRLANGALVLDENFIPTCQSVRVSNTLGRF
HHHHHHHCCCEECCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCHHHEEHHHHHHHH
AGEIQGLVASRAIELASRIGSPEQSGIADVAEFMMLQILNRNQMHFTHRSHLHTLHPEDF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHH
YLDLVKLLGELMTFTENSRLPCPVEPYDHHDLTLSFNTVIPELRRTLNIVLMPRAQNLPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCEEEEEEECCCCCCH
RFMDGIYTATVNDPTLLQSASFVLAVRARMPHNQIILQFTQQSKVAASNKIRDVVSVQVP
HHHCCEEEEECCCCHHHHHCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHEEEEECC
GIPLVPRTAAPRQLPYHEGFVYFDLDKGASAWQDVVKAGALSLHISGTFPELDMQLWAIR
CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCCCEEEEEEC
GQAHE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA