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The map label for this gene is yodC [H]

Identifier: 218549281

GI number: 218549281

Start: 1990596

End: 1990835

Strand: Reverse

Name: yodC [H]

Synonym: EFER_1941

Alternate gene names: 218549281

Gene position: 1990835-1990596 (Counterclockwise)

Preceding gene: 218549282

Following gene: 218549280

Centisome position: 43.39

GC content: 48.75

Gene sequence:

>240_bases
ATGCAAAATCTGCCATCGTCGTCTAAGGTGAAAAAGTTTCACATGATAGAGGAGGCAGGTATGCGCTTTTTGGTCAGTGA
TGAAGTAATCGTCAAACAGGGTGGTCCTCGCATGATCGTCACCGGATATTCCAGTGGCATGGTGGAATGTCGCTGGTATG
ATGGTTTCGCGGTACAACGTGAAGCCTTTCATGAAAGCGAACTGCAAGCTGGTGATGAGAGGCGACTCGAAGAAGCCTGA

Upstream 100 bases:

>100_bases
ATCTGGTACTGGGGTTTATCATTGGCGGGATTGTTCTTATGGCCGTTAAAGCCGTGGCCCGCGTGCGGGGCGTTGCGCAT
TAATTGTTGAAGTAGAAATT

Downstream 100 bases:

>100_bases
CGCATAAACGCCTGGTTAATGCCAGGCGTTTTGCTTTACAGAGATAAAAGAGTGGCTCGTGGCCTCACGACATTGTTTGC
TTATGCCAGAATTATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MQNLPSSSKVKKFHMIEEAGMRFLVSDEVIVKQGGPRMIVTGYSSGMVECRWYDGFAVQREAFHESELQAGDERRLEEA

Sequences:

>Translated_79_residues
MQNLPSSSKVKKFHMIEEAGMRFLVSDEVIVKQGGPRMIVTGYSSGMVECRWYDGFAVQREAFHESELQAGDERRLEEA
>Mature_79_residues
MQNLPSSSKVKKFHMIEEAGMRFLVSDEVIVKQGGPRMIVTGYSSGMVECRWYDGFAVQREAFHESELQAGDERRLEEA

Specific function: Unknown

COG id: COG5475

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788267, Length=58, Percent_Identity=72.4137931034483, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019226 [H]

Pfam domain/function: PF09926 DUF2158 [H]

EC number: NA

Molecular weight: Translated: 9011; Mature: 9011

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLPSSSKVKKFHMIEEAGMRFLVSDEVIVKQGGPRMIVTGYSSGMVECRWYDGFAVQR
CCCCCCCCCHHHHHHHHHCCCEEEECCCEEEECCCCEEEEEECCCCEEEEEEECCEEECH
EAFHESELQAGDERRLEEA
HHHCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQNLPSSSKVKKFHMIEEAGMRFLVSDEVIVKQGGPRMIVTGYSSGMVECRWYDGFAVQR
CCCCCCCCCHHHHHHHHHCCCEEEECCCEEEECCCCEEEEEECCCCEEEEEEECCEEECH
EAFHESELQAGDERRLEEA
HHHCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]