| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yedI [H]
Identifier: 218549282
GI number: 218549282
Start: 1990853
End: 1991764
Strand: Reverse
Name: yedI [H]
Synonym: EFER_1942
Alternate gene names: 218549282
Gene position: 1991764-1990853 (Counterclockwise)
Preceding gene: 218549284
Following gene: 218549281
Centisome position: 43.41
GC content: 51.64
Gene sequence:
>912_bases TTGGCAGGAAGTAGCTTACTTACATTACTCGACGATATCGCCACATTGCTGGACGATATTTCCGTCATGGGGAAACTGGC GGCAAAGAAAACCGCCGGAGTGCTGGGGGATGATTTATCACTCAACGCCCAACAAGTTACAGGTGTGCGGGCCAACCGCG AATTGCCGGTGGTCTGGAGTGTGGCAAAAGGTTCACTCATAAACAAAGTGATCCTCGTGCCCCTGGCGTTACTGATCAGT GCGTTTATTCCCTGGGCGATTACACCGCTATTGATGATTGGTGGTGCGTTTCTCTGCTTTGAAGGGGTAGAGAAAGTCAT GCATATGCTTGAGGCGAGAAAGCATCAGGAAAGCCCGGCAGAACGACAAAAACGCCTGGAGGAGCTGGCGGCGCAAGACC CTCTTACCTTTGAAAAAGATAAAATCAAAGGTGCGGTACGTACCGACTTTATTCTTTCGGCGGAGATTGTGGCGATCACC TTAGGGATTGTAGCTGAAGCGCCATTGTTAAATCAGGTATTGGTGCTTTCCGGTATTGCGCTGGTGGTCACGCTGGGGGT TTATGGATTGGTAGGTATGATCGTGAAACTGGACGATTTGGGCTACTGGTTGGCTGAGAAATCCAGTGTGATTGTACAAG CTATGGGGAAAGCCTTGTTGGTGATCGCGCCCTGGTTGATGAAAGCATTGTCGATAGTGGGCACACTGGCGATGTTCCTG GTTGGTGGCGGCATTGTGGTACATGGCATTGCGCCGCTTGCTCATGCAATTGAACATTTCGCCACTCAGCAAGGCGCAGT GGTGGCGATGATCCTGCCTACAGCCGTGAATCTGGTACTGGGGTTTATCATTGGCGGGATTGTTCTTATGGCCGTTAAAG CCGTGGCCCGCGTGCGGGGCGTTGCGCATTAA
Upstream 100 bases:
>100_bases CACGCATTGTTAAAAAAGTGTTGACGAATGGCGCAGGTGTCAGCAAGGCACGATTTGATTCATACTATGGCATCAACAGA AATAGATAGAGGGATAAACT
Downstream 100 bases:
>100_bases TTGTTGAAGTAGAAATTATGCAAAATCTGCCATCGTCGTCTAAGGTGAAAAAGTTTCACATGATAGAGGAGGCAGGTATG CGCTTTTTGGTCAGTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWSVAKGSLINKVILVPLALLIS AFIPWAITPLLMIGGAFLCFEGVEKVMHMLEARKHQESPAERQKRLEELAAQDPLTFEKDKIKGAVRTDFILSAEIVAIT LGIVAEAPLLNQVLVLSGIALVVTLGVYGLVGMIVKLDDLGYWLAEKSSVIVQAMGKALLVIAPWLMKALSIVGTLAMFL VGGGIVVHGIAPLAHAIEHFATQQGAVVAMILPTAVNLVLGFIIGGIVLMAVKAVARVRGVAH
Sequences:
>Translated_303_residues MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWSVAKGSLINKVILVPLALLIS AFIPWAITPLLMIGGAFLCFEGVEKVMHMLEARKHQESPAERQKRLEELAAQDPLTFEKDKIKGAVRTDFILSAEIVAIT LGIVAEAPLLNQVLVLSGIALVVTLGVYGLVGMIVKLDDLGYWLAEKSSVIVQAMGKALLVIAPWLMKALSIVGTLAMFL VGGGIVVHGIAPLAHAIEHFATQQGAVVAMILPTAVNLVLGFIIGGIVLMAVKAVARVRGVAH >Mature_302_residues AGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWSVAKGSLINKVILVPLALLISA FIPWAITPLLMIGGAFLCFEGVEKVMHMLEARKHQESPAERQKRLEELAAQDPLTFEKDKIKGAVRTDFILSAEIVAITL GIVAEAPLLNQVLVLSGIALVVTLGVYGLVGMIVKLDDLGYWLAEKSSVIVQAMGKALLVIAPWLMKALSIVGTLAMFLV GGGIVVHGIAPLAHAIEHFATQQGAVVAMILPTAVNLVLGFIIGGIVLMAVKAVARVRGVAH
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=303, Percent_Identity=88.4488448844885, Blast_Score=536, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 31936; Mature: 31805
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEE VAKGSLINKVILVPLALLISAFIPWAITPLLMIGGAFLCFEGVEKVMHMLEARKHQESPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ERQKRLEELAAQDPLTFEKDKIKGAVRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA HHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LVVTLGVYGLVGMIVKLDDLGYWLAEKSSVIVQAMGKALLVIAPWLMKALSIVGTLAMFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGGIVVHGIAPLAHAIEHFATQQGAVVAMILPTAVNLVLGFIIGGIVLMAVKAVARVRG HCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VAH CCC >Mature Secondary Structure AGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVTGVRANRELPVVWS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEE VAKGSLINKVILVPLALLISAFIPWAITPLLMIGGAFLCFEGVEKVMHMLEARKHQESPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ERQKRLEELAAQDPLTFEKDKIKGAVRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA HHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LVVTLGVYGLVGMIVKLDDLGYWLAEKSSVIVQAMGKALLVIAPWLMKALSIVGTLAMFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGGIVVHGIAPLAHAIEHFATQQGAVVAMILPTAVNLVLGFIIGGIVLMAVKAVARVRG HCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VAH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]