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The map label for this gene is fliP [H]

Identifier: 218549273

GI number: 218549273

Start: 1984350

End: 1985087

Strand: Direct

Name: fliP [H]

Synonym: EFER_1933

Alternate gene names: 218549273

Gene position: 1984350-1985087 (Clockwise)

Preceding gene: 218549272

Following gene: 218549274

Centisome position: 43.24

GC content: 52.03

Gene sequence:

>738_bases
ATGCGCCGTTTGTTAACGCTTATTCCCGCCATTTTATGGCTGGTGACGCCTTGCGCACTGGCGCAATTGCCCGGCCTTGT
CACCCAACCGTTGCCCGGTGGAGGACAAAGCTGGTCGTTACCGGTGCAGACGCTGGTGTTTATCACCTCGCTGACTTTTA
TTCCGGCCATTTTACTGATGATGACCAGCTTTACCCGCATCATCATCGTTTTTGGTTTGCTACGTAACGCCCTGGGAACG
CCGTCTGCACCACCAAACCAGGTGCTGCTGGGGCTGGCGTTATTTTTGACCTTTTTTATTATGTCGCCGGTAATCGACAA
AATTTACGTCGATGCATATCAGCCATTCAGTGAAGAGAAAATCTCCATGCAGGAAGCGCTGGAAAAAGGCGCTCAGCCGC
TGCGTGAGTTTATGTTGCGCCAGACACGCGAAGCCGATCTTGCGTTATTTGCCCGGCTGGCCAATACCGGGCCGATTCAG
GGACCGGAAGCCGTACCCATGCGTATTCTGCTGCCTGCTTATGTTACCAGTGAGCTGAAAACAGCATTCCAGATTGGTTT
CACTATTTTTATTCCATTTTTGATTATCGATCTGGTCATTGCCAGCGTGCTGATGGCGCTGGGGATGATGATGGTGCCAC
CGGCCACTATCGCTCTGCCGTTTAAACTGATGTTGTTTGTGCTGGTGGATGGCTGGCAGCTGCTGGTCGGTTCGCTGGCC
CAAAGCTTTTACAGTTAG

Upstream 100 bases:

>100_bases
TGCTGCATACATTGCCGCCGGCAGCACCGCTGGACCAACCACCAGCAGTGGATTTTCCCAGCCTGATGAAAAATGTCCTT
AAGCGGTCCGGGAGATCCTG

Downstream 100 bases:

>100_bases
GGAGCACTATGACACCCGAATCGGTGATGATGATGGGGACAGAAGCGATGAAAGTCGCACTGGCCCTTGCTGCCCCGCTG
TTGCTGGTAGCGTTGGTCAC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRRLLTLIPAILWLVTPCALAQLPGLVTQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLALFARLANTGPIQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS

Sequences:

>Translated_245_residues
MRRLLTLIPAILWLVTPCALAQLPGLVTQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLALFARLANTGPIQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS
>Mature_245_residues
MRRLLTLIPAILWLVTPCALAQLPGLVTQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT
PSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLALFARLANTGPIQ
GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA
QSFYS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=245, Percent_Identity=94.6938775510204, Blast_Score=458, Evalue=1e-130,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26939; Mature: 26939

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCC
>Mature Secondary Structure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HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]