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The map label for this gene is fliO [H]

Identifier: 218549272

GI number: 218549272

Start: 1983988

End: 1984350

Strand: Direct

Name: fliO [H]

Synonym: EFER_1932

Alternate gene names: 218549272

Gene position: 1983988-1984350 (Clockwise)

Preceding gene: 218549271

Following gene: 218549273

Centisome position: 43.24

GC content: 55.1

Gene sequence:

>363_bases
ATGCAAACCCAGGCCACTGTCGTCCAGCCTTCTGCCACCACAACTCCGTTGCTACAGGTGAGTGGCGCATTGTTTGGCAT
TATTGTGTTGATACTGGCAGCAGCCTGGCTAATAAAACGGCTGGGATTCACCGCTAAAAATACGGGGGTCAATGGCCTGA
AGGTCAGCGCCAGTGCTTCACTGGGAGCCCGTGAGCGGGTGGTTATTGTCGATGTCGAAGATGCCCGCCTGGTGTTGGGT
GTTACCGCATCGCACATCAATTTGCTGCATACATTGCCGCCGGCAGCACCGCTGGACCAACCACCAGCAGTGGATTTTCC
CAGCCTGATGAAAAATGTCCTTAAGCGGTCCGGGAGATCCTGA

Upstream 100 bases:

>100_bases
ATTGCCCAGGGGGAAGTGGTGGTAGTTGCCGATAAATACGGCGTGCGGATCACCGATATCATTACACCTTCTGAACGTAT
GCGCCGCCTGAGCCGTTGAT

Downstream 100 bases:

>100_bases
TGCGCCGTTTGTTAACGCTTATTCCCGCCATTTTATGGCTGGTGACGCCTTGCGCACTGGCGCAATTGCCCGGCCTTGTC
ACCCAACCGTTGCCCGGTGG

Product: Flagellar protein fliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MQTQATVVQPSATTTPLLQVSGALFGIIVLILAAAWLIKRLGFTAKNTGVNGLKVSASASLGARERVVIVDVEDARLVLG
VTASHINLLHTLPPAAPLDQPPAVDFPSLMKNVLKRSGRS

Sequences:

>Translated_120_residues
MQTQATVVQPSATTTPLLQVSGALFGIIVLILAAAWLIKRLGFTAKNTGVNGLKVSASASLGARERVVIVDVEDARLVLG
VTASHINLLHTLPPAAPLDQPPAVDFPSLMKNVLKRSGRS
>Mature_120_residues
MQTQATVVQPSATTTPLLQVSGALFGIIVLILAAAWLIKRLGFTAKNTGVNGLKVSASASLGARERVVIVDVEDARLVLG
VTASHINLLHTLPPAAPLDQPPAVDFPSLMKNVLKRSGRS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

Organism=Escherichia coli, GI87082005, Length=122, Percent_Identity=73.7704918032787, Blast_Score=117, Evalue=2e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 12560; Mature: 12560

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQATVVQPSATTTPLLQVSGALFGIIVLILAAAWLIKRLGFTAKNTGVNGLKVSASAS
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
LGARERVVIVDVEDARLVLGVTASHINLLHTLPPAAPLDQPPAVDFPSLMKNVLKRSGRS
CCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTQATVVQPSATTTPLLQVSGALFGIIVLILAAAWLIKRLGFTAKNTGVNGLKVSASAS
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
LGARERVVIVDVEDARLVLGVTASHINLLHTLPPAAPLDQPPAVDFPSLMKNVLKRSGRS
CCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]