| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yceF [H]
Identifier: 218549186
GI number: 218549186
Start: 1892198
End: 1892821
Strand: Direct
Name: yceF [H]
Synonym: EFER_1842
Alternate gene names: 218549186
Gene position: 1892198-1892821 (Clockwise)
Preceding gene: 218549161
Following gene: 218549188
Centisome position: 41.24
GC content: 47.44
Gene sequence:
>624_bases TTGGCTTACATCATTACGCTATATCTGGTGGAAAAAAATATGTATGGACTTATTTTAGCTTCGACATCGCCCTGGCGTCG CGCTCTGCTGGACAAACTGGCCGTTACGTTTGAGTGCGCAGCGCCAGAAGTCGATGAAACGCCACTGCCAGGTGAATCTC CGCGTCATTTAGTTTTACGCCTGGCACAAGCAAAAGCGCAATCTTTAGCCGAACGTTATCCGGCCCATTTAATAATTGGT TCCGATCAAGTTTGTGTGCTGGATGGTGAAATTACCGGCAAACCGTTAAGTGAAGAAAATGCTCGCCTGCAATTACGTAA AGCGAGCGGCAATATTGTCACTTTTTATACCGGGCTTGCGCTTTATAATTCAGCAACTGGCAATTTACAGACGGAAGTCG AGCCGTTTGATGTTCATTTCCGCCATCTCAGTGACGCGGAAATAGACAATTATGTGCGAAAAGAACATCCACTCCAGTGT GCTGGCAGTTTTAAAAGCGAAGGTTTGGGTATTGCACTCTTCGAGCGTTTAGAGGGGCGCGACCCGAACACACTGGTCGG TTTACCCTTAATCGCGCTCTGTCAGATGTTACGTCGCGAAGGGAATAACCCGCTAATGGAGTAA
Upstream 100 bases:
>100_bases TGCCTTTTGCCAATAATTCGCACACATTGCGGGTTACAGCCTTATTTTCGTTCAGTGCTGGCAAAGTTGCCAGTCAGCAA AACGAAGCGCATAGTTTAAA
Downstream 100 bases:
>100_bases CAACTGCCCGATAAGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCGATGTTGACTGCCTGATGCGACGCTGCGTATT TTGGTGGAACTCAAGTGCGA
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAYIITLYLVEKNMYGLILASTSPWRRALLDKLAVTFECAAPEVDETPLPGESPRHLVLRLAQAKAQSLAERYPAHLIIG SDQVCVLDGEITGKPLSEENARLQLRKASGNIVTFYTGLALYNSATGNLQTEVEPFDVHFRHLSDAEIDNYVRKEHPLQC AGSFKSEGLGIALFERLEGRDPNTLVGLPLIALCQMLRREGNNPLME
Sequences:
>Translated_207_residues MAYIITLYLVEKNMYGLILASTSPWRRALLDKLAVTFECAAPEVDETPLPGESPRHLVLRLAQAKAQSLAERYPAHLIIG SDQVCVLDGEITGKPLSEENARLQLRKASGNIVTFYTGLALYNSATGNLQTEVEPFDVHFRHLSDAEIDNYVRKEHPLQC AGSFKSEGLGIALFERLEGRDPNTLVGLPLIALCQMLRREGNNPLME >Mature_206_residues AYIITLYLVEKNMYGLILASTSPWRRALLDKLAVTFECAAPEVDETPLPGESPRHLVLRLAQAKAQSLAERYPAHLIIGS DQVCVLDGEITGKPLSEENARLQLRKASGNIVTFYTGLALYNSATGNLQTEVEPFDVHFRHLSDAEIDNYVRKEHPLQCA GSFKSEGLGIALFERLEGRDPNTLVGLPLIALCQMLRREGNNPLME
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=9e-13, Organism=Escherichia coli, GI87081830, Length=193, Percent_Identity=88.6010362694301, Blast_Score=353, Evalue=3e-99, Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=36.2162162162162, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193202443, Length=187, Percent_Identity=33.6898395721925, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI78706856, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 22963; Mature: 22831
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYIITLYLVEKNMYGLILASTSPWRRALLDKLAVTFECAAPEVDETPLPGESPRHLVLR CEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHH LAQAKAQSLAERYPAHLIIGSDQVCVLDGEITGKPLSEENARLQLRKASGNIVTFYTGLA HHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEH LYNSATGNLQTEVEPFDVHFRHLSDAEIDNYVRKEHPLQCAGSFKSEGLGIALFERLEGR HCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHCCC DPNTLVGLPLIALCQMLRREGNNPLME CCCEEECCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AYIITLYLVEKNMYGLILASTSPWRRALLDKLAVTFECAAPEVDETPLPGESPRHLVLR EEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHH LAQAKAQSLAERYPAHLIIGSDQVCVLDGEITGKPLSEENARLQLRKASGNIVTFYTGLA HHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEH LYNSATGNLQTEVEPFDVHFRHLSDAEIDNYVRKEHPLQCAGSFKSEGLGIALFERLEGR HCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHCCC DPNTLVGLPLIALCQMLRREGNNPLME CCCEEECCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA