Click here to switch to the map view.

The map label for this gene is ycfP [C]

Identifier: 218549166

GI number: 218549166

Start: 1875322

End: 1875864

Strand: Reverse

Name: ycfP [C]

Synonym: EFER_1820

Alternate gene names: 218549166

Gene position: 1875864-1875322 (Counterclockwise)

Preceding gene: 218549167

Following gene: 218549165

Centisome position: 40.88

GC content: 44.01

Gene sequence:

>543_bases
ATGATAATTTATTTACACGGTTTTGACTCAAACAGTCCGGGTAACCACGAAAAAGTTTTGCAACTGCAATTTATCGACCC
GGATGTCAGGTTGATAAGCTACAGCACCCGTCATCCAAAACATGACATGCAACATCTGCTGAAAGAGGTGGATAAAATGT
TGCAGTTAAATGTGGATGACCGGCCACTGATTTGTGGTGTCGGATTGGGGGGATACTGGGCGGAAAGAATTGGTTTTTTG
TGTGATATCCGCCAGGTAGTCTTTAATCCTAACCTGTTCCCCTATGAAAATATGGAAGGCAAAATTGATCGCCCGGAAGA
GTATGCTGATATTGCCACCAAGTGCGTGACCAATTTCCGTGAAAAAAACCGCGATCGCTGCCTGGTGATTCTGTCACGTC
ATGATGAGGCCCTTAATAGCCAGCGTTCGGCAGATGAACTTCATCACTTTTATGAAATTGTCTGGGATGAAGAGCAGACT
CATAAGTTCAAAAATATCTCACCGCATTTGCAGCGTATCAAAGCGTTTAAAACCCTCGGCTAA

Upstream 100 bases:

>100_bases
CGCCGCGCTGGAAAAACATTAGCGCCCAATTAAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAACCC
TGACTCAAGGTGAGGATGCG

Downstream 100 bases:

>100_bases
AACAGTCAAAAATGTTGCTATGAAACCAGTCTTCGGACTGGTTTTTTTGATCTAACCACATACCTTTGACTATCTTTTCA
GCAAGAAAACTTGATTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFL
CDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALNSQRSADELHHFYEIVWDEEQT
HKFKNISPHLQRIKAFKTLG

Sequences:

>Translated_180_residues
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFL
CDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALNSQRSADELHHFYEIVWDEEQT
HKFKNISPHLQRIKAFKTLG
>Mature_180_residues
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDDRPLICGVGLGGYWAERIGFL
CDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRHDEALNSQRSADELHHFYEIVWDEEQT
HKFKNISPHLQRIKAFKTLG

Specific function: Unknown

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0227 family [H]

Homologues:

Organism=Escherichia coli, GI87081832, Length=180, Percent_Identity=96.1111111111111, Blast_Score=369, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022987
- InterPro:   IPR008886 [H]

Pfam domain/function: PF05728 UPF0227 [H]

EC number: NA

Molecular weight: Translated: 21161; Mature: 21161

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDD
CEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
RPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFR
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRDRCLVILSRHDEALNSQRSADELHHFYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
HCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDD
CEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
RPLICGVGLGGYWAERIGFLCDIRQVVFNPNLFPYENMEGKIDRPEEYADIATKCVTNFR
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRDRCLVILSRHDEALNSQRSADELHHFYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
HCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA