| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yuaQ [H]
Identifier: 218549133
GI number: 218549133
Start: 1835772
End: 1838510
Strand: Reverse
Name: yuaQ [H]
Synonym: EFER_1785
Alternate gene names: 218549133
Gene position: 1838510-1835772 (Counterclockwise)
Preceding gene: 218549134
Following gene: 218549132
Centisome position: 40.07
GC content: 43.41
Gene sequence:
>2739_bases ATGAAACAAAATAAATTACCAGGGTTTAGCCTGGGATTAATCGCTCTGGCTGTGAATAGTGCATATGCTGATATTGTGAT AACGCCTTCAGATGATAATCAGCATGCAGTGATAATAAATTCAGATACCGTCAATAAGAAGGTGTCAAATTCCATAGTCT ATACTAATAGTAATTCAAGTTATGGGGTTTCTGTTAGTGATGTTGGAGTTGAGGCAACTATAGAGAACTCATTAATAGTA ACATCTGGGGGGCAAGGAGAAAATGGGATTACCTCCAGCGCTGTCGTTAGTGAGTATGGTGCAACAACCACTATGGATGG GGTTAATATTGTATATACATCAGGCGATTATTCAGCAGGACTATTAAGCCAGGTTAATGATAAAGATTTCGATAACTCTG ATGTCGCTGATCAAAACACTATAATCAAAGCAAATGGCTTGAATATCATTATTACAAAAGGAAAAAATGCGTCAGGCGTT TTGGCTTGCTCCAATCCTGGCGATAATCGAACCTGTGTTGATGAAGTGGATGATGTTAAGGATGAGCAGAATGATCATGA AATTGTTAGCCGTGCAGACTTAAAAATGACAGGGGGGGTAATACAGACCACAGGAGATAGAAGCTATGGTGCATATGCTA ACAGGGAAAAATCTTTTATCCAGTTAGATGATGTAATGCTTGCCACTCATGGTGAAGAAAGTCATGCAATTGCTATCAGG CAGGGGAGTATAACGTTTGAAAATAGCCTGATATCTACGGAAGGAGAAAGCGCAAGCATTGCCAAAATCCATAATGGTGG CACGTTGACTTTAACAAATGTCATCGCAACCACAGATAAAGGAACAGGGTTGTCATTCTCAGGAAATATAAATTCTGCTG ATGTCACACTGTCAAATACACAGCTTAACAGTTCCTCAGAAGTTATAGAAGTTAATAATTCTTTAGCTTCGATTGAGATA GGAAATCAGAGTATATTGTCATCAGCTAATAATGTTTTAATCAATAACACTGAAAGTGAACTGGTAGTTAAGGCTTCTGA TTCGACCCTCTATGGTGCGGCGTTAATAAATAATGAGACGGCATCAGAGATTAAAACTGATCTTTCACTTTCTGCAGGTA CTCGATGGTATATGTCAGATTCCTCTACAGTAACCAATCTGACAAACTCTGAGAGTAAAATCTATCTGTCAAACTACGAG AGTCAAACCTTTGATAAAGGTCGTGAGTTAATAGTTAATGGTGACTATCATGGTGATAATGGTTCGCTCTATTTTCGAAC GGTATTAAATGGAGATGATTCGCCAACAGATAAACTAGAGGTCAAAGGAAATACATCTGGTTCAACGAATGTTTATGTCA CAAATGCCGGCGGTACAGGTGAAGCAACAATCAATGGTATTGAGCTGATCACAGTCGGCGGTGATTCCAGTGGTGTATTT AATCAGGTTGGCAGGATCACCGCCGGAGCTTACGAATATGAGTTAAACAAAATCAATAAAAACTGGTATCTGACAAACTT CCTGATTGATGACGCCCCATCAGGTGATGATGATGTAACTCCGCCAGACTCAGATGATGATACTCCGCCAGATACCGGCG ATGAGGACATTACTCCACCGGATTCCGACGATGAAGATGTTACTCCGCCGGACAGTGGTGATCCTATACCAAATCCCGAC GAAGGTAATGACGACAGTGTTCTCCCGGACACTGATTCCGGTAACAACATCAACCCAGCCGGAAACAGCATTCCTGTTTT GCGCCCGGAAGGGGGAAGTTATGTTGCCAACCTGGCAGCGGCAAACAATCTGTTTTTGATGCGCCTGAATGATCGAGCAG GTGAAACGCGTTATATCGATCCTGCCAGAGAACAGGAACGCACAAGCAGATTATGGCTACGCCAGATCGGTGGGCATAAC GCATGGCGTGATAGTAGTGGACAATTGAAAACCACTTCACATCGCTATGTAACACAGCTTGGCGCGGATCTGTTAACCGG TACATTCTGCGAAAAAGATAGCTGGCGCTTTGGTGTGATGGGAGGCTATGCCCGTGACTATAACTCAACTCATTCCTCGA TTTCCGGTTACCGTTCAAAGGGTAGCGTTAGAGGTTACAGTGCCGGTCTGTACGCCACATGGTTTGCTGATGAGGTCAGC AAAAAAGGGGCTTACCTCGACACCTGGGCGCAGTACAGTTGGTTTAAAAACAGTGTGAAAGGCGATGAGCTGGCCTACGA AAGTTACAGTTCGAAAGGGGCAACCGCATCTATAGAAGCAGGATACGGTTTTTCCCTGAATAAACACTCAGGTTTAGAAA ACGCGAAATATGAATGGATCTTCCAACCCCAGGCTCAGGCTATCTGGATGGATGTTGATCATAACGCCCATACTGAAGCC AATGGTACTCGTGTCGAAAACGAAGCGAGCAACAACTTTCAGACCCGATTGGGATTTCGCACCTTTATCCGCACGCAGGA TAAAAACAGTGGTCCGCATGGTGATGACTTCGAACCTTTTGTTGAGATGAACTGGATCCATAACAGCAAAGATTTCGCCG TTTCCATGAATGGCGTGAAAGTTGAGCAGGAAGGGGCGAAAAACCTGGGTGAGATTAAACTCGGTGTTAACGGTAATCTG AGTCCTTCCGCCAGTGTCTGGGGTAACGTCGGCGTGCAGCTCGGTGACAATGGTTATAATGACACCGCCGTTATGCTTGG TTTCAAATATAAATTCTAA
Upstream 100 bases:
>100_bases CTTGTTTTTTTGTTTTTGCCTTTACAGTCAGTTTTGGTAGTCTGGGCTTATAGGTTACGTAATCAGGAATGTTTTTATCC AATGAATGGATGGCTAATCT
Downstream 100 bases:
>100_bases CCTGTAGAAGGTTGTGCCGTGGTGAAAAATACACCACGGCACAAGTCGCTGATCAAATATTCAACGAATATAAATCAATA CTGAATCATTTCAGAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 912; Mature: 912
Protein sequence:
>912_residues MKQNKLPGFSLGLIALAVNSAYADIVITPSDDNQHAVIINSDTVNKKVSNSIVYTNSNSSYGVSVSDVGVEATIENSLIV TSGGQGENGITSSAVVSEYGATTTMDGVNIVYTSGDYSAGLLSQVNDKDFDNSDVADQNTIIKANGLNIIITKGKNASGV LACSNPGDNRTCVDEVDDVKDEQNDHEIVSRADLKMTGGVIQTTGDRSYGAYANREKSFIQLDDVMLATHGEESHAIAIR QGSITFENSLISTEGESASIAKIHNGGTLTLTNVIATTDKGTGLSFSGNINSADVTLSNTQLNSSSEVIEVNNSLASIEI GNQSILSSANNVLINNTESELVVKASDSTLYGAALINNETASEIKTDLSLSAGTRWYMSDSSTVTNLTNSESKIYLSNYE SQTFDKGRELIVNGDYHGDNGSLYFRTVLNGDDSPTDKLEVKGNTSGSTNVYVTNAGGTGEATINGIELITVGGDSSGVF NQVGRITAGAYEYELNKINKNWYLTNFLIDDAPSGDDDVTPPDSDDDTPPDTGDEDITPPDSDDEDVTPPDSGDPIPNPD EGNDDSVLPDTDSGNNINPAGNSIPVLRPEGGSYVANLAAANNLFLMRLNDRAGETRYIDPAREQERTSRLWLRQIGGHN AWRDSSGQLKTTSHRYVTQLGADLLTGTFCEKDSWRFGVMGGYARDYNSTHSSISGYRSKGSVRGYSAGLYATWFADEVS KKGAYLDTWAQYSWFKNSVKGDELAYESYSSKGATASIEAGYGFSLNKHSGLENAKYEWIFQPQAQAIWMDVDHNAHTEA NGTRVENEASNNFQTRLGFRTFIRTQDKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQEGAKNLGEIKLGVNGNL SPSASVWGNVGVQLGDNGYNDTAVMLGFKYKF
Sequences:
>Translated_912_residues MKQNKLPGFSLGLIALAVNSAYADIVITPSDDNQHAVIINSDTVNKKVSNSIVYTNSNSSYGVSVSDVGVEATIENSLIV TSGGQGENGITSSAVVSEYGATTTMDGVNIVYTSGDYSAGLLSQVNDKDFDNSDVADQNTIIKANGLNIIITKGKNASGV LACSNPGDNRTCVDEVDDVKDEQNDHEIVSRADLKMTGGVIQTTGDRSYGAYANREKSFIQLDDVMLATHGEESHAIAIR QGSITFENSLISTEGESASIAKIHNGGTLTLTNVIATTDKGTGLSFSGNINSADVTLSNTQLNSSSEVIEVNNSLASIEI GNQSILSSANNVLINNTESELVVKASDSTLYGAALINNETASEIKTDLSLSAGTRWYMSDSSTVTNLTNSESKIYLSNYE SQTFDKGRELIVNGDYHGDNGSLYFRTVLNGDDSPTDKLEVKGNTSGSTNVYVTNAGGTGEATINGIELITVGGDSSGVF NQVGRITAGAYEYELNKINKNWYLTNFLIDDAPSGDDDVTPPDSDDDTPPDTGDEDITPPDSDDEDVTPPDSGDPIPNPD EGNDDSVLPDTDSGNNINPAGNSIPVLRPEGGSYVANLAAANNLFLMRLNDRAGETRYIDPAREQERTSRLWLRQIGGHN AWRDSSGQLKTTSHRYVTQLGADLLTGTFCEKDSWRFGVMGGYARDYNSTHSSISGYRSKGSVRGYSAGLYATWFADEVS KKGAYLDTWAQYSWFKNSVKGDELAYESYSSKGATASIEAGYGFSLNKHSGLENAKYEWIFQPQAQAIWMDVDHNAHTEA NGTRVENEASNNFQTRLGFRTFIRTQDKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQEGAKNLGEIKLGVNGNL SPSASVWGNVGVQLGDNGYNDTAVMLGFKYKF >Mature_912_residues MKQNKLPGFSLGLIALAVNSAYADIVITPSDDNQHAVIINSDTVNKKVSNSIVYTNSNSSYGVSVSDVGVEATIENSLIV TSGGQGENGITSSAVVSEYGATTTMDGVNIVYTSGDYSAGLLSQVNDKDFDNSDVADQNTIIKANGLNIIITKGKNASGV LACSNPGDNRTCVDEVDDVKDEQNDHEIVSRADLKMTGGVIQTTGDRSYGAYANREKSFIQLDDVMLATHGEESHAIAIR QGSITFENSLISTEGESASIAKIHNGGTLTLTNVIATTDKGTGLSFSGNINSADVTLSNTQLNSSSEVIEVNNSLASIEI GNQSILSSANNVLINNTESELVVKASDSTLYGAALINNETASEIKTDLSLSAGTRWYMSDSSTVTNLTNSESKIYLSNYE SQTFDKGRELIVNGDYHGDNGSLYFRTVLNGDDSPTDKLEVKGNTSGSTNVYVTNAGGTGEATINGIELITVGGDSSGVF NQVGRITAGAYEYELNKINKNWYLTNFLIDDAPSGDDDVTPPDSDDDTPPDTGDEDITPPDSDDEDVTPPDSGDPIPNPD EGNDDSVLPDTDSGNNINPAGNSIPVLRPEGGSYVANLAAANNLFLMRLNDRAGETRYIDPAREQERTSRLWLRQIGGHN AWRDSSGQLKTTSHRYVTQLGADLLTGTFCEKDSWRFGVMGGYARDYNSTHSSISGYRSKGSVRGYSAGLYATWFADEVS KKGAYLDTWAQYSWFKNSVKGDELAYESYSSKGATASIEAGYGFSLNKHSGLENAKYEWIFQPQAQAIWMDVDHNAHTEA NGTRVENEASNNFQTRLGFRTFIRTQDKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGVKVEQEGAKNLGEIKLGVNGNL SPSASVWGNVGVQLGDNGYNDTAVMLGFKYKF
Specific function: Unknown
COG id: COG3468
COG function: function code MU; Type V secretory pathway, adhesin AidA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI1788565, Length=328, Percent_Identity=32.6219512195122, Blast_Score=171, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR012332 - InterPro: IPR011050 - InterPro: IPR004899 [H]
Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]
EC number: NA
Molecular weight: Translated: 97967; Mature: 97967
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNKLPGFSLGLIALAVNSAYADIVITPSDDNQHAVIINSDTVNKKVSNSIVYTNSNSS CCCCCCCCCHHEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCHHCCCEEEECCCCC YGVSVSDVGVEATIENSLIVTSGGQGENGITSSAVVSEYGATTTMDGVNIVYTSGDYSAG CCEEEECCCEEEEECCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCEEEEEECCCCCCH LLSQVNDKDFDNSDVADQNTIIKANGLNIIITKGKNASGVLACSNPGDNRTCVDEVDDVK HHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHC DEQNDHEIVSRADLKMTGGVIQTTGDRSYGAYANREKSFIQLDDVMLATHGEESHAIAIR CCCCCHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEE QGSITFENSLISTEGESASIAKIHNGGTLTLTNVIATTDKGTGLSFSGNINSADVTLSNT ECCEEEECCEEECCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCCEEEEECC QLNSSSEVIEVNNSLASIEIGNQSILSSANNVLINNTESELVVKASDSTLYGAALINNET CCCCCCCEEEECCCEEEEEECCHHHHHCCCCEEEECCCCEEEEEECCCEEEEEEEECCCC ASEIKTDLSLSAGTRWYMSDSSTVTNLTNSESKIYLSNYESQTFDKGRELIVNGDYHGDN HHHHHHCEEECCCEEEEECCCCEEEEECCCCCEEEEECCCCHHHCCCCEEEEECCEECCC GSLYFRTVLNGDDSPTDKLEVKGNTSGSTNVYVTNAGGTGEATINGIELITVGGDSSGVF CCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECEEEEEEECCCCCCHH NQVGRITAGAYEYELNKINKNWYLTNFLIDDAPSGDDDVTPPDSDDDTPPDTGDEDITPP HHHCCEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSDDEDVTPPDSGDPIPNPDEGNDDSVLPDTDSGNNINPAGNSIPVLRPEGGSYVANLAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE ANNLFLMRLNDRAGETRYIDPAREQERTSRLWLRQIGGHNAWRDSSGQLKTTSHRYVTQL CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHH GADLLTGTFCEKDSWRFGVMGGYARDYNSTHSSISGYRSKGSVRGYSAGLYATWFADEVS HHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEHHHHH KKGAYLDTWAQYSWFKNSVKGDELAYESYSSKGATASIEAGYGFSLNKHSGLENAKYEWI CCCCEEEHHHHHHHHHCCCCCCCEEHHHHCCCCCEEEEECCCCEEECCCCCCCCCCEEEE FQPQAQAIWMDVDHNAHTEANGTRVENEASNNFQTRLGFRTFIRTQDKNSGPHGDDFEPF ECCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCHHHCEEEEEEECCCCCCCCCCCCCCE VEMNWIHNSKDFAVSMNGVKVEQEGAKNLGEIKLGVNGNLSPSASVWGNVGVQLGDNGYN EEEEEEECCCCEEEEECCEEEEHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCC DTAVMLGFKYKF CCEEEEEEEECC >Mature Secondary Structure MKQNKLPGFSLGLIALAVNSAYADIVITPSDDNQHAVIINSDTVNKKVSNSIVYTNSNSS CCCCCCCCCHHEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCHHCCCEEEECCCCC YGVSVSDVGVEATIENSLIVTSGGQGENGITSSAVVSEYGATTTMDGVNIVYTSGDYSAG CCEEEECCCEEEEECCEEEEEECCCCCCCCCHHHHHHHCCCEEEECCEEEEEECCCCCCH LLSQVNDKDFDNSDVADQNTIIKANGLNIIITKGKNASGVLACSNPGDNRTCVDEVDDVK HHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHC DEQNDHEIVSRADLKMTGGVIQTTGDRSYGAYANREKSFIQLDDVMLATHGEESHAIAIR CCCCCHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEE QGSITFENSLISTEGESASIAKIHNGGTLTLTNVIATTDKGTGLSFSGNINSADVTLSNT ECCEEEECCEEECCCCCCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCCEEEEECC QLNSSSEVIEVNNSLASIEIGNQSILSSANNVLINNTESELVVKASDSTLYGAALINNET CCCCCCCEEEECCCEEEEEECCHHHHHCCCCEEEECCCCEEEEEECCCEEEEEEEECCCC ASEIKTDLSLSAGTRWYMSDSSTVTNLTNSESKIYLSNYESQTFDKGRELIVNGDYHGDN HHHHHHCEEECCCEEEEECCCCEEEEECCCCCEEEEECCCCHHHCCCCEEEEECCEECCC GSLYFRTVLNGDDSPTDKLEVKGNTSGSTNVYVTNAGGTGEATINGIELITVGGDSSGVF CCEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECEEEEEEECCCCCCHH NQVGRITAGAYEYELNKINKNWYLTNFLIDDAPSGDDDVTPPDSDDDTPPDTGDEDITPP HHHCCEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSDDEDVTPPDSGDPIPNPDEGNDDSVLPDTDSGNNINPAGNSIPVLRPEGGSYVANLAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE ANNLFLMRLNDRAGETRYIDPAREQERTSRLWLRQIGGHNAWRDSSGQLKTTSHRYVTQL CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHH GADLLTGTFCEKDSWRFGVMGGYARDYNSTHSSISGYRSKGSVRGYSAGLYATWFADEVS HHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEHHHHH KKGAYLDTWAQYSWFKNSVKGDELAYESYSSKGATASIEAGYGFSLNKHSGLENAKYEWI CCCCEEEHHHHHHHHHCCCCCCCEEHHHHCCCCCEEEEECCCCEEECCCCCCCCCCEEEE FQPQAQAIWMDVDHNAHTEANGTRVENEASNNFQTRLGFRTFIRTQDKNSGPHGDDFEPF ECCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCHHHCEEEEEEECCCCCCCCCCCCCCE VEMNWIHNSKDFAVSMNGVKVEQEGAKNLGEIKLGVNGNLSPSASVWGNVGVQLGDNGYN EEEEEEECCCCEEEEECCEEEEHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCC DTAVMLGFKYKF CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA