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The map label for this gene is dadA [H]

Identifier: 218549114

GI number: 218549114

Start: 1816150

End: 1817448

Strand: Reverse

Name: dadA [H]

Synonym: EFER_1766

Alternate gene names: 218549114

Gene position: 1817448-1816150 (Counterclockwise)

Preceding gene: 218549116

Following gene: 218549113

Centisome position: 39.61

GC content: 51.27

Gene sequence:

>1299_bases
ATGCGAGTTGTCATACTGGGAAGTGGTGTGGTTGGCGTGACCAGCGCCTGGTATTTGAGTCAGGCAGGACATGACGTCAC
TGTCATTGATCGTGAGCCTGGCCCGGCACTGGAAACCAGTGCTGCCAATGCCGGGCAAATTTCTCCGGGGTATGCGGCAC
CATGGGCGGCACCAGGCGTACCACTGAAAGCCATTAAATGGATGTTCCAGCGCCATGCGCCACTGGCAGTGCGTCTGGAC
GGTACTCAGTTCCAGTTAAAATGGATGTGGCAAATGCTGCGTAACTGCGATACCAGCCACTATATGGAAAACAAAGGGCG
CATGGTGCGCCTGGCGGAGTACAGTCGTGATTGCCTGAAAGAGTTGCGTGCCGCGACAGGAATTGAATATGAAGGTCGTC
AGGGTGGCACATTGCAGTTGTTTCGGACTGAACAACAGTTTGAAAACGCCACTCGTGATATCGCAGTTCTGGAAGATGCA
GGCGTACCATATCAGTTGCTTGAATCAAATCGCCTGGCAGAAGTTGAACCGGCACTGGCAGCTGTCGCACATAAACTGAC
TGGGGGATTGCGCTTACCAAATGATGAAACAGGTGACTGCCAACTGTTTACCCAGCGACTCGCGCAGATGGCGGAGCAGG
CTGGTGTGAAGTTCCGCTTTAATACACCAGTAGACAAACTGTTGTTTGAAGGTGAGCAAATTTACGGTGTGAAATGTGGT
GATGAGGTCATTAAAGCTGATGCCTACGTGATGGCCTTTGGATCTTATTCTACGGCAATGTTGAAAGGAATCGTCGATAT
TCCGGTTTATCCGCTTAAGGGGTATTCCTTAACCATTCCGGTTGCAAACGAAGATGGCGCGCCAGTTTCCACTATTCTTG
ATGAAACTTACAAAATTGCGATTACCCGCTTTGATAATCGTATACGTGTCGGTGGTATGGCGGAAATTGTTGGTTTTAAT
ACCGAACTGCTGCAACCGCGCCGCGAAACGCTGGAAATGGTGGTACGTGATCTCTACCCACGGGGGGGGCATATTGAGCA
GGCGACTTTCTGGACGGGCCTGCGTCCAATGACGCCAGATGGTACACCTGTGGTGGGGCGTACAAGTTTCAAAAATTTAT
GGTTAAACACAGGGCACGGTACACTGGGCTGGACAATGGCTTGTGGTTCCGGGCAATTACTGAGTGACATTCTTTCTGGC
CGTACCCCGGCTATTCCTTACGATGATCTGAGCGTGGCGCGTTACAGCAGTGGTTTTAGCCCGGCAAGACCGCGTCATTT
GCACGGTGTTCATAACTAA

Upstream 100 bases:

>100_bases
AGCCAGCTCACCATAAAAAAGCCATATGTTGAATAATATTTTCATCTGAGTTATCAAGATGTAATTAGTTTATTGTTCTT
TTACCGTTATCGGAGTGGCT

Downstream 100 bases:

>100_bases
AAGGAAACGAAATGACGCGACCTATACAGGCCAGTGTTGATTTACAGGCGTTGAAACAAAATCTGGCGATTGTCCGCCGG
GCTGCGCCTGATGCGCGCGT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDREPGPALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKELRAATGIEYEGRQGGTLQLFRTEQQFENATRDIAVLEDA
GVPYQLLESNRLAEVEPALAAVAHKLTGGLRLPNDETGDCQLFTQRLAQMAEQAGVKFRFNTPVDKLLFEGEQIYGVKCG
DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPVANEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFN
TELLQPRRETLEMVVRDLYPRGGHIEQATFWTGLRPMTPDGTPVVGRTSFKNLWLNTGHGTLGWTMACGSGQLLSDILSG
RTPAIPYDDLSVARYSSGFSPARPRHLHGVHN

Sequences:

>Translated_432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDREPGPALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKELRAATGIEYEGRQGGTLQLFRTEQQFENATRDIAVLEDA
GVPYQLLESNRLAEVEPALAAVAHKLTGGLRLPNDETGDCQLFTQRLAQMAEQAGVKFRFNTPVDKLLFEGEQIYGVKCG
DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPVANEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFN
TELLQPRRETLEMVVRDLYPRGGHIEQATFWTGLRPMTPDGTPVVGRTSFKNLWLNTGHGTLGWTMACGSGQLLSDILSG
RTPAIPYDDLSVARYSSGFSPARPRHLHGVHN
>Mature_432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDREPGPALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKELRAATGIEYEGRQGGTLQLFRTEQQFENATRDIAVLEDA
GVPYQLLESNRLAEVEPALAAVAHKLTGGLRLPNDETGDCQLFTQRLAQMAEQAGVKFRFNTPVDKLLFEGEQIYGVKCG
DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPVANEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFN
TELLQPRRETLEMVVRDLYPRGGHIEQATFWTGLRPMTPDGTPVVGRTSFKNLWLNTGHGTLGWTMACGSGQLLSDILSG
RTPAIPYDDLSVARYSSGFSPARPRHLHGVHN

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=432, Percent_Identity=93.287037037037, Blast_Score=844, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47578; Mature: 47578

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDREPGPALETSAANAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
ELRAATGIEYEGRQGGTLQLFRTEQQFENATRDIAVLEDAGVPYQLLESNRLAEVEPALA
HHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHHHHHH
AVAHKLTGGLRLPNDETGDCQLFTQRLAQMAEQAGVKFRFNTPVDKLLFEGEQIYGVKCG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEEECC
DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPVANEDGAPVSTILDETYKIA
HHHHHCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCEEEE
ITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHIEQATFWTGLRPMTPD
EEEECCEEEECCEEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCC
GTPVVGRTSFKNLWLNTGHGTLGWTMACGSGQLLSDILSGRTPAIPYDDLSVARYSSGFS
CCCEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
PARPRHLHGVHN
CCCCCCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDREPGPALETSAANAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
ELRAATGIEYEGRQGGTLQLFRTEQQFENATRDIAVLEDAGVPYQLLESNRLAEVEPALA
HHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHHHHHH
AVAHKLTGGLRLPNDETGDCQLFTQRLAQMAEQAGVKFRFNTPVDKLLFEGEQIYGVKCG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEEECC
DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPVANEDGAPVSTILDETYKIA
HHHHHCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCEEEE
ITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHIEQATFWTGLRPMTPD
EEEECCEEEECCEEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCCCC
GTPVVGRTSFKNLWLNTGHGTLGWTMACGSGQLLSDILSGRTPAIPYDDLSVARYSSGFS
CCCEECCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
PARPRHLHGVHN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA