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The map label for this gene is ychJ

Identifier: 218549072

GI number: 218549072

Start: 1770932

End: 1771390

Strand: Direct

Name: ychJ

Synonym: EFER_1722

Alternate gene names: 218549072

Gene position: 1770932-1771390 (Clockwise)

Preceding gene: 218549068

Following gene: 218549073

Centisome position: 38.59

GC content: 45.75

Gene sequence:

>459_bases
GTGTCTCAACTTTGTCCCTGCGGTAGCGCAGTCGAGTATAGCCTATGTTGTCAGCGTTATCTTTCCGGTAATCAACTTGC
ACCAGATCCGGTACAACTCATGCGTTCGCGTTACAGCGCGTTTGTTATGAAAGATGCAGATTATTTAATCAAGACATGGC
ATTCATCGTGTGGAGTTGCGCAGCTGCGCGACGATATTATTGCCGGATTTGCTCATACCGAGTGGTTGGGTTTGACTGTG
TTTGACCATGCCCTTACCACTGATGGAAAGACAGGATATGTTAGTTTTGTCGCTCGTTATTCTGAGCGAGGTAGAGCTGG
CGCAATTATTGAACGCTCGCGTTTTATAAAAGAAAATGGCCAGTGGTACTATATTGATGGTACACGTCCGCAGTTTGGTC
GAAATGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA

Upstream 100 bases:

>100_bases
TTCCCCTGGTCTGCAGACATAGCAACATTGCCACTGCTCAGTTAACATAGCGCTACCCAGGGCGTCCATACGCCACTTTT
TTATTTCAGGGAGATGATTT

Downstream 100 bases:

>100_bases
CAGCTGACGGCATGTAACCATGCAAACACTCTCTTACAAGGTTTTACCAGCAATGCATTCACTACAACGAAAAGTTCTGC
GTACTATTTGCCCTGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSQLCPCGSAVEYSLCCQRYLSGNQLAPDPVQLMRSRYSAFVMKDADYLIKTWHSSCGVAQLRDDIIAGFAHTEWLGLTV
FDHALTTDGKTGYVSFVARYSERGRAGAIIERSRFIKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Sequences:

>Translated_152_residues
MSQLCPCGSAVEYSLCCQRYLSGNQLAPDPVQLMRSRYSAFVMKDADYLIKTWHSSCGVAQLRDDIIAGFAHTEWLGLTV
FDHALTTDGKTGYVSFVARYSERGRAGAIIERSRFIKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
>Mature_151_residues
SQLCPCGSAVEYSLCCQRYLSGNQLAPDPVQLMRSRYSAFVMKDADYLIKTWHSSCGVAQLRDDIIAGFAHTEWLGLTVF
DHALTTDGKTGYVSFVARYSERGRAGAIIERSRFIKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=152, Percent_Identity=78.2894736842105, Blast_Score=259, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCHJ_ESCF3 (B7LSF2)

Other databases:

- EMBL:   CU928158
- RefSeq:   YP_002382863.1
- ProteinModelPortal:   B7LSF2
- EnsemblBacteria:   EBESCT00000125290
- GeneID:   7121151
- GenomeReviews:   CU928158_GR
- KEGG:   efe:EFER_1722
- GeneTree:   EBGT00050000010014
- HOGENOM:   HBG609508
- ProtClustDB:   PRK01617
- BioCyc:   EFER585054:EFER_1722-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17029; Mature: 16897

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLCPCGSAVEYSLCCQRYLSGNQLAPDPVQLMRSRYSAFVMKDADYLIKTWHSSCGVA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH
QLRDDIIAGFAHTEWLGLTVFDHALTTDGKTGYVSFVARYSERGRAGAIIERSRFIKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SQLCPCGSAVEYSLCCQRYLSGNQLAPDPVQLMRSRYSAFVMKDADYLIKTWHSSCGVA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH
QLRDDIIAGFAHTEWLGLTVFDHALTTDGKTGYVSFVARYSERGRAGAIIERSRFIKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA