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The map label for this gene is ydeE [H]

Identifier: 218548896

GI number: 218548896

Start: 1574919

End: 1576106

Strand: Reverse

Name: ydeE [H]

Synonym: EFER_1541

Alternate gene names: 218548896

Gene position: 1576106-1574919 (Counterclockwise)

Preceding gene: 218548898

Following gene: 218548893

Centisome position: 34.35

GC content: 48.32

Gene sequence:

>1188_bases
ATGAATCTTACCCTGAGACGTTCTACCGCAGCTTTACTGGCCTCTTCATTACTTTTAACCATTGGTCGCGGAGCCACACT
GCCGTTTATGACGATTTATCTGAGTCGGCAATATGCCCTCAGCGTCGATTCGATCGGTTACGCAATGACCTTCGCCCTGA
CCATTGGTGTTATCTTTAGTCTCGGTTTTGGCATCCTGGCAGATAAGTTCGATAAAAAACGCTATATGCTGCTGGCGATT
CTGGCTTTTGCATCAGGTTTCATCGTCATCCCACTGGTAAATTCAGTCAGTTTAGTCGTTCTGCTATTCGCGTTGATCAA
TTGCGCCTACTCTGTCTTTGCCACAGTGTTAAAAGCGTGGTTTGCCGAGAATCTCTCGTCCACCAGCAAAACAAAAATGT
TCTCGCTCAATTACACCATGTTGAATATCGGCTGGACGGTCGGCCCTCCGCTTGGCACATTACTGGTGATGCAAAGTATT
AATCTGCCCTTTTGGCTGGCTGCGGTCTGCTCTGCTTTTCCACTGCTATTTATACAATTCTGGGTTCAGCGGGCTAGCGC
AAATGTCGATACTTCCCGCAGTGAGGTCTGGTCTCCCGCCATTTTATTACAGGATAAAGCCCTGCTCTGGTTTACCTTGT
CTGCATTCCTGGCTTCATTTGTCTGCGGTGCTTTTGCATCCTGTTTATCGCAGTATGTGATGGTGGTAGCCGATAACGAC
TTTGCTGAGCTGGTGATTGCCGTAGTACTACCTGTGAACGCTGCGATGGTGGTCACACTGCAATACTCCATTGGTCGGCG
TTTATCTGCAGAGAATATTCGTCCGTTAATGACGCTGGGCACGGTCTGTTTTGTTATCGGTCTGGTCGGGTTTATGTTTT
CCGGCAACAACCTTTTGTTCTGGGGAATATCTGCGGCGGTGTTTACCATTGGTGAAATTATTTACGCCCCTGGTGAATAT
ATGCTGATCGACCATATTGCGCCTAATGGCATGAAAGCCAGTTATTTTTCAGCACAATCGCTGGGGTGGTTGGGGGCAGC
ATTTAATCCGTTGGTCAGCGGAATGATCCTGACTTCTCTGCCTGCATGGTCACTGTTTTTAGTGTTAATGGTGGCTATCG
TCTTCGCGTGGGCATTGATGCTGAAAGGTATGCGGGTAAAACCGAGGGCACTGCCGGTGGTTTGCTGA

Upstream 100 bases:

>100_bases
AGAATCTCTTGCTGGCGTTACGCTATACAGCACCCGTTTCTCATGCTATTTCTTTACATAACTCAATAAAACATAACGAA
ACGCGACATCGGACTACCTG

Downstream 100 bases:

>100_bases
AAGGTTTGCTGGCGAAAGCAGTCCTGGATGAGAGATAAAAAAAACCGCTGGAGTGACCAGCGGAAAATGCTTGCATGGAT
ATACTCGACATAATTCAAGT

Product: MFS-type transporter YdeE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNLTLRRSTAALLASSLLLTIGRGATLPFMTIYLSRQYALSVDSIGYAMTFALTIGVIFSLGFGILADKFDKKRYMLLAI
LAFASGFIVIPLVNSVSLVVLLFALINCAYSVFATVLKAWFAENLSSTSKTKMFSLNYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAVCSAFPLLFIQFWVQRASANVDTSRSEVWSPAILLQDKALLWFTLSAFLASFVCGAFASCLSQYVMVVADND
FAELVIAVVLPVNAAMVVTLQYSIGRRLSAENIRPLMTLGTVCFVIGLVGFMFSGNNLLFWGISAAVFTIGEIIYAPGEY
MLIDHIAPNGMKASYFSAQSLGWLGAAFNPLVSGMILTSLPAWSLFLVLMVAIVFAWALMLKGMRVKPRALPVVC

Sequences:

>Translated_395_residues
MNLTLRRSTAALLASSLLLTIGRGATLPFMTIYLSRQYALSVDSIGYAMTFALTIGVIFSLGFGILADKFDKKRYMLLAI
LAFASGFIVIPLVNSVSLVVLLFALINCAYSVFATVLKAWFAENLSSTSKTKMFSLNYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAVCSAFPLLFIQFWVQRASANVDTSRSEVWSPAILLQDKALLWFTLSAFLASFVCGAFASCLSQYVMVVADND
FAELVIAVVLPVNAAMVVTLQYSIGRRLSAENIRPLMTLGTVCFVIGLVGFMFSGNNLLFWGISAAVFTIGEIIYAPGEY
MLIDHIAPNGMKASYFSAQSLGWLGAAFNPLVSGMILTSLPAWSLFLVLMVAIVFAWALMLKGMRVKPRALPVVC
>Mature_395_residues
MNLTLRRSTAALLASSLLLTIGRGATLPFMTIYLSRQYALSVDSIGYAMTFALTIGVIFSLGFGILADKFDKKRYMLLAI
LAFASGFIVIPLVNSVSLVVLLFALINCAYSVFATVLKAWFAENLSSTSKTKMFSLNYTMLNIGWTVGPPLGTLLVMQSI
NLPFWLAAVCSAFPLLFIQFWVQRASANVDTSRSEVWSPAILLQDKALLWFTLSAFLASFVCGAFASCLSQYVMVVADND
FAELVIAVVLPVNAAMVVTLQYSIGRRLSAENIRPLMTLGTVCFVIGLVGFMFSGNNLLFWGISAAVFTIGEIIYAPGEY
MLIDHIAPNGMKASYFSAQSLGWLGAAFNPLVSGMILTSLPAWSLFLVLMVAIVFAWALMLKGMRVKPRALPVVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787815, Length=395, Percent_Identity=81.0126582278481, Blast_Score=626, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42984; Mature: 42984

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLRRSTAALLASSLLLTIGRGATLPFMTIYLSRQYALSVDSIGYAMTFALTIGVIFS
CCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHEECHHHEEEHHHHHHHHHHHHHHHHHHH
LGFGILADKFDKKRYMLLAILAFASGFIVIPLVNSVSLVVLLFALINCAYSVFATVLKAW
HHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAENLSSTSKTKMFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAVCSAFPLLFIQF
HHHHCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WVQRASANVDTSRSEVWSPAILLQDKALLWFTLSAFLASFVCGAFASCLSQYVMVVADND
HHHHHCCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
FAELVIAVVLPVNAAMVVTLQYSIGRRLSAENIRPLMTLGTVCFVIGLVGFMFSGNNLLF
HHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
WGISAAVFTIGEIIYAPGEYMLIDHIAPNGMKASYFSAQSLGWLGAAFNPLVSGMILTSL
EEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCHHHCHHHHHHHHHHHHHHHHHHC
PAWSLFLVLMVAIVFAWALMLKGMRVKPRALPVVC
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLTLRRSTAALLASSLLLTIGRGATLPFMTIYLSRQYALSVDSIGYAMTFALTIGVIFS
CCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHEECHHHEEEHHHHHHHHHHHHHHHHHHH
LGFGILADKFDKKRYMLLAILAFASGFIVIPLVNSVSLVVLLFALINCAYSVFATVLKAW
HHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAENLSSTSKTKMFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAVCSAFPLLFIQF
HHHHCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
WVQRASANVDTSRSEVWSPAILLQDKALLWFTLSAFLASFVCGAFASCLSQYVMVVADND
HHHHHCCCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
FAELVIAVVLPVNAAMVVTLQYSIGRRLSAENIRPLMTLGTVCFVIGLVGFMFSGNNLLF
HHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
WGISAAVFTIGEIIYAPGEYMLIDHIAPNGMKASYFSAQSLGWLGAAFNPLVSGMILTSL
EEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCHHHCHHHHHHHHHHHHHHHHHHC
PAWSLFLVLMVAIVFAWALMLKGMRVKPRALPVVC
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]