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The map label for this gene is ydeJ [H]

Identifier: 218548893

GI number: 218548893

Start: 1572523

End: 1573056

Strand: Reverse

Name: ydeJ [H]

Synonym: EFER_1538

Alternate gene names: 218548893

Gene position: 1573056-1572523 (Counterclockwise)

Preceding gene: 218548896

Following gene: 218548891

Centisome position: 34.28

GC content: 50.56

Gene sequence:

>534_bases
TTGCGGAAAAGAAAAATGAAATTAAAGCCTGAAAATATTGTTCTGCTTAATCAACAGCATTCCACTTCATATTTGACCGC
CACGTTGGGCGAATATTTGATTCGTCACAATTTGCGTCTGACCACGGCGGAATCATGCACTGGAGGGAAACTGGCCTCAG
CACTTTGCGCTGCCAACGACACGCCGAAATTTTATGGCGTGGGATTTGTCACCTTTACCGATAAGGCAAAAGCTAAAATT
CTCGGCGTGAGTGAACATAGTCTGGCTGAGTTTACGGCGGTAAGTGAAACCGTTGTCCGGCAAATGGCAGCAGGTGCCAG
AGAGCGGGCCGGGACAGATATCAGCATTGCGATAACCGGATATGGTGGCCCTGAAGGCGGTGACGACGGTACGCCAGCTG
GTACCGTCTGGTTTGGCTGGAATATTTCCGGTCAGCCTTTTACCGCCGTACAGCAATTCTCCGGGGATTGCGAACAAGTG
CTGGCGCAATCTGTTCGCTTCGCCCTTGCACAATTGCTGCTTTTACTCCCCTGA

Upstream 100 bases:

>100_bases
TTTTTACAACCATGACGGGCGCTATTTCGGAACAATCAGCAAACTCAATCCCCTTTGCGACATGTCATACTGAATAAGGC
ACTAATATCCATCTGGACCG

Downstream 100 bases:

>100_bases
CAGGATGAAAAAAACGGGCCGTAATGTCAGGCCCGTACTTGTCTTAACTCAGTCCGCGATTTTTTAGCATCGCTTCAATA
CGCGGTGCATGACCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRKRKMKLKPENIVLLNQQHSTSYLTATLGEYLIRHNLRLTTAESCTGGKLASALCAANDTPKFYGVGFVTFTDKAKAKI
LGVSEHSLAEFTAVSETVVRQMAAGARERAGTDISIAITGYGGPEGGDDGTPAGTVWFGWNISGQPFTAVQQFSGDCEQV
LAQSVRFALAQLLLLLP

Sequences:

>Translated_177_residues
MRKRKMKLKPENIVLLNQQHSTSYLTATLGEYLIRHNLRLTTAESCTGGKLASALCAANDTPKFYGVGFVTFTDKAKAKI
LGVSEHSLAEFTAVSETVVRQMAAGARERAGTDISIAITGYGGPEGGDDGTPAGTVWFGWNISGQPFTAVQQFSGDCEQV
LAQSVRFALAQLLLLLP
>Mature_177_residues
MRKRKMKLKPENIVLLNQQHSTSYLTATLGEYLIRHNLRLTTAESCTGGKLASALCAANDTPKFYGVGFVTFTDKAKAKI
LGVSEHSLAEFTAVSETVVRQMAAGARERAGTDISIAITGYGGPEGGDDGTPAGTVWFGWNISGQPFTAVQQFSGDCEQV
LAQSVRFALAQLLLLLP

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1787818, Length=162, Percent_Identity=66.0493827160494, Blast_Score=221, Evalue=2e-59,
Organism=Escherichia coli, GI1789052, Length=149, Percent_Identity=40.2684563758389, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 18954; Mature: 18954

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRKMKLKPENIVLLNQQHSTSYLTATLGEYLIRHNLRLTTAESCTGGKLASALCAAND
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCC
TPKFYGVGFVTFTDKAKAKILGVSEHSLAEFTAVSETVVRQMAAGARERAGTDISIAITG
CCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEE
YGGPEGGDDGTPAGTVWFGWNISGQPFTAVQQFSGDCEQVLAQSVRFALAQLLLLLP
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKRKMKLKPENIVLLNQQHSTSYLTATLGEYLIRHNLRLTTAESCTGGKLASALCAAND
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCC
TPKFYGVGFVTFTDKAKAKILGVSEHSLAEFTAVSETVVRQMAAGARERAGTDISIAITG
CCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEE
YGGPEGGDDGTPAGTVWFGWNISGQPFTAVQQFSGDCEQVLAQSVRFALAQLLLLLP
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]