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The map label for this gene is bdm

Identifier: 218548853

GI number: 218548853

Start: 1533932

End: 1534147

Strand: Reverse

Name: bdm

Synonym: EFER_1498

Alternate gene names: 218548853

Gene position: 1534147-1533932 (Counterclockwise)

Preceding gene: 218548855

Following gene: 218548851

Centisome position: 33.43

GC content: 45.83

Gene sequence:

>216_bases
ATGTTTACTTATTATCAGGCAGAAAATTCAACAGCAGAACCCGCTCTGGTTAATGCCATTGAGCAAGGCCTTCGGGCAGA
GCACGGTGTTGTCACTGAAGATGACATTCTCATGGAGCTGACCAAATGGGTGGAAGCTTCTGATAACGACATCCTCAGTG
ATATCTACCAACAAACGATCAATTATGTGGTCAGTGGCCAGCACCCTACGCTTTAA

Upstream 100 bases:

>100_bases
ATCTTAACAACGAAGCGATAAATATTTGCCATGCTGAATGTGCGTTATAAATCTGCGATCCGTAGCAGACACCATAAATA
CACAGACACGGAGAATCACT

Downstream 100 bases:

>100_bases
GGTGCTATGCTTGATCGGCAACCTAATTTAGGGGTTTAGCACGTGTTTCTTCGCTACGGCGATGTTGTCCTTAAAACTAG
CAACAGGATTGAGGAGTTAA

Product: biofilm-dependent modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL

Sequences:

>Translated_71_residues
MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL
>Mature_71_residues
MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081920, Length=71, Percent_Identity=98.5915492957747, Blast_Score=146, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BDM_ECO57 (P65640)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85728
- PIR:   E90889
- RefSeq:   NP_287674.2
- RefSeq:   NP_310112.2
- EnsemblBacteria:   EBESCT00000025497
- EnsemblBacteria:   EBESCT00000060011
- GeneID:   917280
- GeneID:   960687
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2229
- KEGG:   ecs:ECs2085
- GeneTree:   EBGT00050000010474
- HOGENOM:   HBG469130
- OMA:   THYSANT
- ProtClustDB:   PRK11436
- BioCyc:   ECOL83334:ECS2085-MONOMER
- InterPro:   IPR019625

Pfam domain/function: PF10684 BDM

EC number: NA

Molecular weight: Translated: 7988; Mature: 7988

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTI
CCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
NYVVSGQHPTL
HHHHCCCCCCC
>Mature Secondary Structure
MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTI
CCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
NYVVSGQHPTL
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796