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The map label for this gene is ydgI [H]

Identifier: 218548793

GI number: 218548793

Start: 1471716

End: 1473098

Strand: Reverse

Name: ydgI [H]

Synonym: EFER_1432

Alternate gene names: 218548793

Gene position: 1473098-1471716 (Counterclockwise)

Preceding gene: 218548794

Following gene: 218548792

Centisome position: 32.1

GC content: 49.46

Gene sequence:

>1383_bases
ATGGAAAAAAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTTGGCGCTGGCGTATTCAGCCTGCC
GCAAAATATGGCGGCAGTTGCCAGTCCGGCGGCCTTACTCATCGGCTGGGCCATTACCGGGGCCGGAATTCTGTTACTGG
CCTTTGCCATGTTGGTATTAACGAGAATTCGCCCTGACCTTGACGGTGGCATCTTCACTTATGCCCGTGAAGGATTTGGA
GAATTGATCGGTTTCTGTTCTGCATGGGGCTACTGGCTTTGTGCGGTAGTTGCCAACGTCTCGTATCTGGTTATCGTTTT
CTCGGCACTCAGCTTCTTTACTGATACCCCAGAACTGCGTCTGTTCGGTGATGGCAACACCTGGCAATCTATTGTGGGTG
CTTCGCTATTGTTGTGGGTTGTTCATTTTCTGGTGTTACGTGGTGTACAAACCGCTGCCACTATCAACCTGGTCGCGACA
CTGGCAAAACTTCTGCCGCTCGGTTTATTTATCGTGCTGGCATTTTTAATGTTTCGCATGGATATTTTTAGCCTTGATTT
TACTGGCGTTGAATTAGGCGTTCCGGTCTGGGAACAGGTTAAAAACACCATGCTGATCACGCTGTGGGTGTTTATCGGGG
TTGAGGGCGCGGTTGTTGTCTCCTCTCGTGCAAGAAATAAACGCGATGTTGGTCGTGCCACGTTGCTGGCTGTTCTTGCT
GCGCTTGGTGTCTATTTACTGGTGACGTTACTTTCGCTTGGTGTTGTAGCTCGCCCGGAGCTGGCTGAGTTGCGTAACCC
ATCAATGGCGGGTCTGCTGGTCAAAATGATGGGCCCATGGGGTGAAGTTATTATCGCCGCCGGGTTAATCGTCTCCGTTT
GTGGTGCTTATTTAAGCTGGACGATTATGGCAGCCGAAGTACCGTTTCTTGCTGCAACTCACAAAGCGTTCCCTCGTATT
TTCGCTCGTCAGAACGCCAATGGAGCACCTTCAGCCTCTTTATGGTTGACGAACATTTGCGTGCAAGTATCGCTGGTATT
GATCTGGCTTACCGGTTCTGATTACAACACATTGTTGACCATTGCTTCAGAGATGATTCTGGTGCCCTATTTCCTGGTCG
GTGCCTATTTACTTAAAATTGCCACTCGCCCAATACATCAGGCTGTAGGTGTCGGCGCATGCATTTATGGCTTATGGTTA
CTCTATGCTTCCGGGCCAATGCATTTGCTGTTATCTGTTGTGTTGTATGCTCCAGGTCTTCTGGTATTCCTGTACGCACG
TAAAACACATACCCATGATAATGTATTGAACCGCCAGGAAATGGTGCTGATTAGTTTACTGTTAGTCGCGGCTATTCCTG
CGACGTGGATACTGGTGGGATAA

Upstream 100 bases:

>100_bases
ACTCTCCCCGTAAAATCGCGCGCCTTAGTGGCATTCACCATTTTTATGCGTTTTGCCCTAATAATTATTCTGACTCACTC
GTTTTGATGACTGGACACCG

Downstream 100 bases:

>100_bases
CATGAATCCCATCGTTTGACGCTAAGGAGCTACGATGGGTCATTCCCGCGCATTCCCTGTTCTTATTACGGGTGGAGGCC
GTCGCATCGGCCTCGCTCTC

Product: arginine/ornithine antiporter transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGAGILLLAFAMLVLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVVANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASLLLWVVHFLVLRGVQTAATINLVAT
LAKLLPLGLFIVLAFLMFRMDIFSLDFTGVELGVPVWEQVKNTMLITLWVFIGVEGAVVVSSRARNKRDVGRATLLAVLA
ALGVYLLVTLLSLGVVARPELAELRNPSMAGLLVKMMGPWGEVIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI
FARQNANGAPSASLWLTNICVQVSLVLIWLTGSDYNTLLTIASEMILVPYFLVGAYLLKIATRPIHQAVGVGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLISLLLVAAIPATWILVG

Sequences:

>Translated_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGAGILLLAFAMLVLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVVANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASLLLWVVHFLVLRGVQTAATINLVAT
LAKLLPLGLFIVLAFLMFRMDIFSLDFTGVELGVPVWEQVKNTMLITLWVFIGVEGAVVVSSRARNKRDVGRATLLAVLA
ALGVYLLVTLLSLGVVARPELAELRNPSMAGLLVKMMGPWGEVIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI
FARQNANGAPSASLWLTNICVQVSLVLIWLTGSDYNTLLTIASEMILVPYFLVGAYLLKIATRPIHQAVGVGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLISLLLVAAIPATWILVG
>Mature_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGAGILLLAFAMLVLTRIRPDLDGGIFTYAREGFG
ELIGFCSAWGYWLCAVVANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASLLLWVVHFLVLRGVQTAATINLVAT
LAKLLPLGLFIVLAFLMFRMDIFSLDFTGVELGVPVWEQVKNTMLITLWVFIGVEGAVVVSSRARNKRDVGRATLLAVLA
ALGVYLLVTLLSLGVVARPELAELRNPSMAGLLVKMMGPWGEVIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRI
FARQNANGAPSASLWLTNICVQVSLVLIWLTGSDYNTLLTIASEMILVPYFLVGAYLLKIATRPIHQAVGVGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLISLLLVAAIPATWILVG

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=460, Percent_Identity=91.9565217391304, Blast_Score=859, Evalue=0.0,
Organism=Escherichia coli, GI2367353, Length=428, Percent_Identity=30.1401869158879, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI1786908, Length=423, Percent_Identity=26.7139479905437, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1790575, Length=442, Percent_Identity=23.3031674208145, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49506; Mature: 49506

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGAGILLLAFAMLVL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVVANVSYLVIVFSALSFFTDTPELR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQSIVGASLLLWVVHFLVLRGVQTAATINLVATLAKLLPLGLFIVLAFLMFRM
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIFSLDFTGVELGVPVWEQVKNTMLITLWVFIGVEGAVVVSSRARNKRDVGRATLLAVLA
HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH
ALGVYLLVTLLSLGVVARPELAELRNPSMAGLLVKMMGPWGEVIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAATHKAFPRIFARQNANGAPSASLWLTNICVQVSLVLIWLTGSDYNTLLT
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHH
IASEMILVPYFLVGAYLLKIATRPIHQAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
LVFLYARKTHTHDNVLNRQEMVLISLLLVAAIPATWILVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEC
>Mature Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGAGILLLAFAMLVL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVVANVSYLVIVFSALSFFTDTPELR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQSIVGASLLLWVVHFLVLRGVQTAATINLVATLAKLLPLGLFIVLAFLMFRM
EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIFSLDFTGVELGVPVWEQVKNTMLITLWVFIGVEGAVVVSSRARNKRDVGRATLLAVLA
HHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHH
ALGVYLLVTLLSLGVVARPELAELRNPSMAGLLVKMMGPWGEVIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAATHKAFPRIFARQNANGAPSASLWLTNICVQVSLVLIWLTGSDYNTLLT
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHH
IASEMILVPYFLVGAYLLKIATRPIHQAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHH
LVFLYARKTHTHDNVLNRQEMVLISLLLVAAIPATWILVG
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]