| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is folM [H]
Identifier: 218548792
GI number: 218548792
Start: 1470959
End: 1471681
Strand: Reverse
Name: folM [H]
Synonym: EFER_1431
Alternate gene names: 218548792
Gene position: 1471681-1470959 (Counterclockwise)
Preceding gene: 218548793
Following gene: 218548790
Centisome position: 32.07
GC content: 48.69
Gene sequence:
>723_bases ATGGGTCATTCCCGCGCATTCCCTGTTCTTATTACGGGTGGAGGCCGTCGCATCGGCCTCGCTCTCGCATGGCATTTTAT CAATCAAAAACAACCTGTAATTGTCAGTTACCGAACACACTACCCGGCAATTGATGGTTTGAAGAAGGCCGGTGCGCTTT GTATTCAGGCTGATTTCTCCACAGATGAAGGTATATTAGCATTTGCTGAACAGGTAAAAGCTGCAACACCGGGTTTACGG GCGATTTTGCATAACGCCAGTGCCTGGATGGCAGAGAAGCCGGGGATTCCACTCCCGGACGTTTTATCATGCATGATGCA GATCCATGTTAGCGCGCCGTACTTACTCAACCATGCACTGGAACCGTTACTGCGCGGCCATGGACACGCAGCGAGCGATA TTATCCACTTCACTGATTACGTCGTCGAACGCGGTAGCGATAAACATATCGCCTATGCTGCAAGTAAAGCCGCGCTGGAT AATATGACCAGGTCGTTTGCCCGCAAACTGGCGCCTGAAGTTAAAGTCAATGCTATTGCACCATCGCTGATTTTATTTAA CGAACATGACGATGCGGAGTATCGCCAGCAGGCACTGAATAAATCACTGATGAAAACCGCACCTGGTGAAAAGGAAGTAA TTGAATTAGTTGATTATTTGCTCACAAGCTGTTTTGTTACCGGGCGTAGTTTTCCCCTGGATGGTGGTCGTCATCTGCGT TAA
Upstream 100 bases:
>100_bases GAAATGGTGCTGATTAGTTTACTGTTAGTCGCGGCTATTCCTGCGACGTGGATACTGGTGGGATAACATGAATCCCATCG TTTGACGCTAAGGAGCTACG
Downstream 100 bases:
>100_bases TGCAGTTTTATCCAGCAGAAAATTAACAACCATGCGCTAAGCCCCCAGCAGATAACCGCCCCTCCGAGTGCTGCGGGCAG GCGCATAAATCCGGTGAGAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: DHFR [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGHSRAFPVLITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLKKAGALCIQADFSTDEGILAFAEQVKAATPGLR AILHNASAWMAEKPGIPLPDVLSCMMQIHVSAPYLLNHALEPLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNAIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIELVDYLLTSCFVTGRSFPLDGGRHLR
Sequences:
>Translated_240_residues MGHSRAFPVLITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLKKAGALCIQADFSTDEGILAFAEQVKAATPGLR AILHNASAWMAEKPGIPLPDVLSCMMQIHVSAPYLLNHALEPLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNAIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIELVDYLLTSCFVTGRSFPLDGGRHLR >Mature_239_residues GHSRAFPVLITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLKKAGALCIQADFSTDEGILAFAEQVKAATPGLRA ILHNASAWMAEKPGIPLPDVLSCMMQIHVSAPYLLNHALEPLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN MTRSFARKLAPEVKVNAIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIELVDYLLTSCFVTGRSFPLDGGRHLR
Specific function: Catalyzes the reduction of dihydrofolate to tetrahydrofolate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FolM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787891, Length=240, Percent_Identity=88.75, Blast_Score=447, Evalue=1e-127, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=28.3400809716599, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 26272; Mature: 26140
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSRAFPVLITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLKKAGALCIQADFS CCCCCCCEEEEECCCCEEHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEECCC TDEGILAFAEQVKAATPGLRAILHNASAWMAEKPGIPLPDVLSCMMQIHVSAPYLLNHAL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH EPLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNAIA HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIELVDYLLTSCFVTGRSFPLDGGRHLR CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GHSRAFPVLITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLKKAGALCIQADFS CCCCCCEEEEECCCCEEHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCEEEEECCC TDEGILAFAEQVKAATPGLRAILHNASAWMAEKPGIPLPDVLSCMMQIHVSAPYLLNHAL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH EPLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNAIA HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIELVDYLLTSCFVTGRSFPLDGGRHLR CEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA