| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is yecI [H]
Identifier: 218548493
GI number: 218548493
Start: 1162249
End: 1162752
Strand: Reverse
Name: yecI [H]
Synonym: EFER_1121
Alternate gene names: 218548493
Gene position: 1162752-1162249 (Counterclockwise)
Preceding gene: 218548499
Following gene: 218548492
Centisome position: 25.34
GC content: 46.63
Gene sequence:
>504_bases ATGGCTACGGTTGGTATTGTTCATAAACTCAATAAGCAACTGAATCTTGAGTTTTATGCGTCTAATCTCTACCTTCGCCT GAGCGAATGGTGTTCTGAACAAAGCCTGACAGGTACAGCCACATTTTTGCGCTCACAAGCGCAAGGCAACATTACCCAGA TGATGCGTATGTTCAACTTTATGAAAAGCGCAGGTGCATTTCCTATTGTGGATGCCATTGATATGCCTGGCGATAAGTTG AATTCACTGGAAGAACTGGTTCAGAAAACGCTCGATGATTTAGAGCAGCGCTCCAGCACTCTCTCTCGTCTGGCTGACGA AGCCAAAGCCGTTAACGATGCGTCTACTCTCGATTTCCTGCATGATCTTGGTAAAACCCAACAGCAAGACAGCATTTTGC TGCAAAATGTGATGGATGCAGTACGCAGCGCCAAACGCGCAGGTTTATGCCTGGCGCAAACTGATCAGCATCTGTTTAAC GTGGTTTCCCACCGTCTGCATTGA
Upstream 100 bases:
>100_bases GCCACAGCGTATTAAGGAACGGCAGAACGGAATATGTCTGCTATACATAGTTAAGTGCTGCGAATCGCACGCACCCCTCT CTGGATATAAGGATATTGTT
Downstream 100 bases:
>100_bases TGCTTATGGCCGGAGTTTTGCCTATCGTCACTCCGGCCTGTCGTTTTATCCCGTATAAACGCTGCGTTTCCTGCGACTAT TCCAGCCATTAAACCGTTGC
Product: ferritin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MATVGIVHKLNKQLNLEFYASNLYLRLSEWCSEQSLTGTATFLRSQAQGNITQMMRMFNFMKSAGAFPIVDAIDMPGDKL NSLEELVQKTLDDLEQRSSTLSRLADEAKAVNDASTLDFLHDLGKTQQQDSILLQNVMDAVRSAKRAGLCLAQTDQHLFN VVSHRLH
Sequences:
>Translated_167_residues MATVGIVHKLNKQLNLEFYASNLYLRLSEWCSEQSLTGTATFLRSQAQGNITQMMRMFNFMKSAGAFPIVDAIDMPGDKL NSLEELVQKTLDDLEQRSSTLSRLADEAKAVNDASTLDFLHDLGKTQQQDSILLQNVMDAVRSAKRAGLCLAQTDQHLFN VVSHRLH >Mature_166_residues ATVGIVHKLNKQLNLEFYASNLYLRLSEWCSEQSLTGTATFLRSQAQGNITQMMRMFNFMKSAGAFPIVDAIDMPGDKLN SLEELVQKTLDDLEQRSSTLSRLADEAKAVNDASTLDFLHDLGKTQQQDSILLQNVMDAVRSAKRAGLCLAQTDQHLFNV VSHRLH
Specific function: Unknown
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788212, Length=167, Percent_Identity=71.8562874251497, Blast_Score=254, Evalue=2e-69, Organism=Escherichia coli, GI1788216, Length=158, Percent_Identity=32.2784810126582, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18688; Mature: 18556
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGIVHKLNKQLNLEFYASNLYLRLSEWCSEQSLTGTATFLRSQAQGNITQMMRMFNF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH MKSAGAFPIVDAIDMPGDKLNSLEELVQKTLDDLEQRSSTLSRLADEAKAVNDASTLDFL HHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HDLGKTQQQDSILLQNVMDAVRSAKRAGLCLAQTDQHLFNVVSHRLH HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATVGIVHKLNKQLNLEFYASNLYLRLSEWCSEQSLTGTATFLRSQAQGNITQMMRMFNF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH MKSAGAFPIVDAIDMPGDKLNSLEELVQKTLDDLEQRSSTLSRLADEAKAVNDASTLDFL HHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH HDLGKTQQQDSILLQNVMDAVRSAKRAGLCLAQTDQHLFNVVSHRLH HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]