Click here to switch to the map view.

The map label for this gene is yecR [H]

Identifier: 218548492

GI number: 218548492

Start: 1161768

End: 1162103

Strand: Reverse

Name: yecR [H]

Synonym: EFER_1120

Alternate gene names: 218548492

Gene position: 1162103-1161768 (Counterclockwise)

Preceding gene: 218548493

Following gene: 218548491

Centisome position: 25.33

GC content: 47.62

Gene sequence:

>336_bases
ATGAAAATCGTATTCCTTTCTTTGATTCTTCTTACGCTGAGCGGCTGCACCGTGACTCGCCAGGCGCATGTCAGTGAAAT
TGATGTACCTAATGCAGTGGTACGTTTGACCTGGCAACAAATGATACTGCAAGATGCCCGAACAGACCCATATGTCGCCC
AGGGGCTGGCCAATAATGCTTGCCTACAGTCTGGCTTCGGTCAGGCTGTCGCTTACGGACAACCAGTGGCAACTTGTAGC
CTGTTTGCCGGATCATTATGTCTGAACACGACCTTTACCCTTTCCTATCAATGTCAGCCTTCTACTCCGATTATTGTTCA
ATTTTACCCTGATTAA

Upstream 100 bases:

>100_bases
TTATCCCGTATAAACGCTGCGTTTCCTGCGACTATTCCAGCCATTAAACCGTTGCGCCCTTCGCTAAAATAGATGACCAG
GCAATTGAGGCGGCAACAAC

Downstream 100 bases:

>100_bases
ATATCGTTAATGCGTTTAATTCCCATTTGTATTATTAATATATTTACCGATATTTTACCTTTTGCAAATAATTAAATAAC
AAATTATAGTGGCGGCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNACLQSGFGQAVAYGQPVATCS
LFAGSLCLNTTFTLSYQCQPSTPIIVQFYPD

Sequences:

>Translated_111_residues
MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNACLQSGFGQAVAYGQPVATCS
LFAGSLCLNTTFTLSYQCQPSTPIIVQFYPD
>Mature_111_residues
MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNACLQSGFGQAVAYGQPVATCS
LFAGSLCLNTTFTLSYQCQPSTPIIVQFYPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788215, Length=101, Percent_Identity=61.3861386138614, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12045; Mature: 12045

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNA
CCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCH
CLQSGFGQAVAYGQPVATCSLFAGSLCLNTTFTLSYQCQPSTPIIVQFYPD
HHHCCCCCEEECCCCHHHHHHHHCCEEECEEEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNA
CCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCH
CLQSGFGQAVAYGQPVATCSLFAGSLCLNTTFTLSYQCQPSTPIIVQFYPD
HHHCCCCCEEECCCCHHHHHHHHCCEEECEEEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]