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The map label for this gene is yfcN [H]

Identifier: 218548214

GI number: 218548214

Start: 848936

End: 849487

Strand: Reverse

Name: yfcN [H]

Synonym: EFER_0832

Alternate gene names: 218548214

Gene position: 849487-848936 (Counterclockwise)

Preceding gene: 218548221

Following gene: 218548202

Centisome position: 18.51

GC content: 50.91

Gene sequence:

>552_bases
ATGAAAAAGAAATCATCACTTAGTGAGGAGGACCAGGCGCTTTTCCGCCAGTTGATGGCGGGGACCCGCCAGATAAAGCA
GGACACCATTGTCCATCGGCCGCCGCGTAAAAAAATTAGCGAAGTACCAGTCAAGCGGTTAATCCAGGAACAGGCCGATG
CCAGCCATTATTTCTCCGATGAGTTTCAACCGTTATTGAATACCGAAGGTCCGGTGAAATATGTCCGTCCGGATGTCAGC
CACTTTGAAGCGAAGAAACTGCGCCGCGGCGATTATTCGCCGGAATTGTTTTTGGATTTACACGGTTTGACGCAATTGCA
AGCTAAGCAGGAACTTGGGGCTCTGATTGCCACCTGCCGTCGTGAACATGTGTTTTGCGCCTGCGTGATGCATGGTCATG
GTAAGCATATTTTGAAGCAGCAAACGCCGCTGTGGCTGGCGCAACATCCCCATGTGATGGCATTTCATCAGGCACCGAAA
GAGTACGGCGGTGATGCAGCTTTATTAGTGTTGATTGAAGTGGAAGAGTGGTTGCCGCCTGAGTTGCCCTGA

Upstream 100 bases:

>100_bases
TCAGCATTCACGCGCGGTGAGTGAGGAAAAATACGTTTAAAACGATCGATTAGACGACGAGTCGGGTAAACTGTAGGAAA
ATTAGAAATGAGAGATGTAA

Downstream 100 bases:

>100_bases
CATCATTATCAACATGTACTTTCACCGACCAGCTAACTGGTCGGTGAAATAATGTTACAACATATTCAACACATACTGGA
ATCGACAGGTAGAATCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKKKSSLSEEDQALFRQLMAGTRQIKQDTIVHRPPRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIATCRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP

Sequences:

>Translated_183_residues
MKKKSSLSEEDQALFRQLMAGTRQIKQDTIVHRPPRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIATCRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP
>Mature_183_residues
MKKKSSLSEEDQALFRQLMAGTRQIKQDTIVHRPPRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIATCRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
EYGGDAALLVLIEVEEWLPPELP

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=183, Percent_Identity=97.2677595628415, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20985; Mature: 20985

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSSLSEEDQALFRQLMAGTRQIKQDTIVHRPPRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIATCR
HHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP
HCCEEEEEEECCCCHHHHHHCCCEEECCCCCEEEHHHCHHHHCCCEEEEEEEEHHHCCCC
ELP
CCC
>Mature Secondary Structure
MKKKSSLSEEDQALFRQLMAGTRQIKQDTIVHRPPRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIATCR
HHHHHHCCCCCCEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP
HCCEEEEEEECCCCHHHHHHCCCEEECCCCCEEEHHHCHHHHCCCEEEEEEEEHHHCCCC
ELP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]