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The map label for this gene is ttuB [H]

Identifier: 218548175

GI number: 218548175

Start: 810785

End: 812170

Strand: Reverse

Name: ttuB [H]

Synonym: EFER_0792

Alternate gene names: 218548175

Gene position: 812170-810785 (Counterclockwise)

Preceding gene: 218548188

Following gene: 218548173

Centisome position: 17.7

GC content: 48.77

Gene sequence:

>1386_bases
GTGGAGCCCGACATGAATGACTCTTCGAGCGTATTATCGCCGCCTTCCAGTACTCAGGACGCACTGGATCCACGTCAACA
AGCGGTAATAAAAAAGTTATTCCGCCGATTAATTGTTTTCTTATTTATTTTATTTGTTTTCTCTTACCTCGACCGAATTA
ATATTGGTTTTGCCGGTTTAACAATGGGCAAAGATTTAGGATTAACCAGTACAATGTTCGGCCTGGCGACGACACTTTTT
TATGTGATGTATGTGATTTGTGGGATACCCAGCAATATTATGTTGGGTATTGTCGGTGCCCGACGCTGGATAGCCGTATT
AATGGTTGTCTGGGGGATTGCCTCCACGGCGACAATGTTTGCCACAGGACCAAATAGCCTTTATGTACTGCGAATGTTGG
TCGGGATTGCCGAAGCAGGCTTCCTGCCAGGGCTGCTGCTCTATTTAACCTACTGGTTCCCGTCGCAGTACCGCGCCCGT
GCTAACGCCTTGTTTATGATAGCGATGCCGGTAACGATGGCATTAGGTTCACTGGCATCAGGCTATATTTTGAATATGGA
CGGTTTATTAAACCTGAAAGGCTGGCAGTGGTTATTTCTGCTGGAGGGTTTTCCATCTGTATTATTAGGTCTGGTAGTAT
GGTTCTGGCTGGATGATTCTCCGGCGAAAGCCAAATGGCTGACCGACGACGATAAAGCCTGCCTTAATGAAATGATGGAA
GCGGATAAGCGGGCAATTCAACAATCGCGGCAAAATGCCAGCGTCGGTATGATGTCGCAGCGCAGTATGTTGCGGGAATT
ATTTACTCCGGTCATTATGCTCTACACGTTGGCTTATTTCTGCCTGACGAATACTCTCAGCGCATTAAGTGTCTGGACAC
CGCTTATTTTGCAGAGTTTTAATCAGCAAAGTAATAACATCACCATTGGTTTGCTTAGTGCCATTCCGCAAGTGTGCACT
ATTGTCGGCATGGTGTGGTGGAGCAAGCGTTCCGACCGCTTAAATGAACGTAAATTCCACACCCTGTTACCTTATCTTTT
TGCAGCTGCTGGCTGGATACTTACTGCCACCAGCAGCAACCCGATGCTGCAATTCAGCGGTATCGTGATGGCATCTGCCG
GGGCATTTGCCGCGATGGTAATTTTCTGGACCACGCCGGACCAGTCTATCTCGGTTCAGGCGCGTGCGCTGGGGATTGCG
GTGATTAACGCCACCGGGATGACCGGCGCGGCGTTGGGGCCGCTGCTGATGGGATGGATGAAAGATATCACCGGTAGCTT
TAACGCGGGTATCTATATGGTCGCCGCATTCCTCGTGCTCGGCGCAGTGGTGGTTGCCTTTATTCCGATGAAAAGAATGG
CGGTCAAAAAAAGCTTAGCGCTATAA

Upstream 100 bases:

>100_bases
ACCTATAGGTTAGCGCACGTGTTCGGATAGCCAGTTTTAAGCAAATAATCCTGAGCATGATAAAGATTCGCCTGCTAACA
AAATAATATTACATTGCATT

Downstream 100 bases:

>100_bases
AACACCGGGAATTCAAAGAACAGATATGTTTCTTCTTGCCGGATACGGCGTTAATGTCTTATCCGGCATTTCAATAAATT
ACGATTAACATAACAGGCAC

Product: tartrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MEPDMNDSSSVLSPPSSTQDALDPRQQAVIKKLFRRLIVFLFILFVFSYLDRINIGFAGLTMGKDLGLTSTMFGLATTLF
YVMYVICGIPSNIMLGIVGARRWIAVLMVVWGIASTATMFATGPNSLYVLRMLVGIAEAGFLPGLLLYLTYWFPSQYRAR
ANALFMIAMPVTMALGSLASGYILNMDGLLNLKGWQWLFLLEGFPSVLLGLVVWFWLDDSPAKAKWLTDDDKACLNEMME
ADKRAIQQSRQNASVGMMSQRSMLRELFTPVIMLYTLAYFCLTNTLSALSVWTPLILQSFNQQSNNITIGLLSAIPQVCT
IVGMVWWSKRSDRLNERKFHTLLPYLFAAAGWILTATSSNPMLQFSGIVMASAGAFAAMVIFWTTPDQSISVQARALGIA
VINATGMTGAALGPLLMGWMKDITGSFNAGIYMVAAFLVLGAVVVAFIPMKRMAVKKSLAL

Sequences:

>Translated_461_residues
MEPDMNDSSSVLSPPSSTQDALDPRQQAVIKKLFRRLIVFLFILFVFSYLDRINIGFAGLTMGKDLGLTSTMFGLATTLF
YVMYVICGIPSNIMLGIVGARRWIAVLMVVWGIASTATMFATGPNSLYVLRMLVGIAEAGFLPGLLLYLTYWFPSQYRAR
ANALFMIAMPVTMALGSLASGYILNMDGLLNLKGWQWLFLLEGFPSVLLGLVVWFWLDDSPAKAKWLTDDDKACLNEMME
ADKRAIQQSRQNASVGMMSQRSMLRELFTPVIMLYTLAYFCLTNTLSALSVWTPLILQSFNQQSNNITIGLLSAIPQVCT
IVGMVWWSKRSDRLNERKFHTLLPYLFAAAGWILTATSSNPMLQFSGIVMASAGAFAAMVIFWTTPDQSISVQARALGIA
VINATGMTGAALGPLLMGWMKDITGSFNAGIYMVAAFLVLGAVVVAFIPMKRMAVKKSLAL
>Mature_461_residues
MEPDMNDSSSVLSPPSSTQDALDPRQQAVIKKLFRRLIVFLFILFVFSYLDRINIGFAGLTMGKDLGLTSTMFGLATTLF
YVMYVICGIPSNIMLGIVGARRWIAVLMVVWGIASTATMFATGPNSLYVLRMLVGIAEAGFLPGLLLYLTYWFPSQYRAR
ANALFMIAMPVTMALGSLASGYILNMDGLLNLKGWQWLFLLEGFPSVLLGLVVWFWLDDSPAKAKWLTDDDKACLNEMME
ADKRAIQQSRQNASVGMMSQRSMLRELFTPVIMLYTLAYFCLTNTLSALSVWTPLILQSFNQQSNNITIGLLSAIPQVCT
IVGMVWWSKRSDRLNERKFHTLLPYLFAAAGWILTATSSNPMLQFSGIVMASAGAFAAMVIFWTTPDQSISVQARALGIA
VINATGMTGAALGPLLMGWMKDITGSFNAGIYMVAAFLVLGAVVVAFIPMKRMAVKKSLAL

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=436, Percent_Identity=31.1926605504587, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1789515, Length=465, Percent_Identity=23.6559139784946, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI87082320, Length=416, Percent_Identity=24.0384615384615, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789152, Length=470, Percent_Identity=23.4042553191489, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI2367379, Length=456, Percent_Identity=23.0263157894737, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322025, Length=407, Percent_Identity=25.0614250614251, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324410, Length=162, Percent_Identity=27.1604938271605, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322612, Length=242, Percent_Identity=24.3801652892562, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319876, Length=480, Percent_Identity=21.4583333333333, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321698, Length=217, Percent_Identity=25.3456221198157, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50719; Mature: 50719

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPDMNDSSSVLSPPSSTQDALDPRQQAVIKKLFRRLIVFLFILFVFSYLDRINIGFAGL
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TMGKDLGLTSTMFGLATTLFYVMYVICGIPSNIMLGIVGARRWIAVLMVVWGIASTATMF
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ATGPNSLYVLRMLVGIAEAGFLPGLLLYLTYWFPSQYRARANALFMIAMPVTMALGSLAS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEEHHHHHHHHHHHHC
GYILNMDGLLNLKGWQWLFLLEGFPSVLLGLVVWFWLDDSPAKAKWLTDDDKACLNEMME
CEEEECCCCEECCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ADKRAIQQSRQNASVGMMSQRSMLRELFTPVIMLYTLAYFCLTNTLSALSVWTPLILQSF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQQSNNITIGLLSAIPQVCTIVGMVWWSKRSDRLNERKFHTLLPYLFAAAGWILTATSSN
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC
PMLQFSGIVMASAGAFAAMVIFWTTPDQSISVQARALGIAVINATGMTGAALGPLLMGWM
CCEEECCCCEECCCCCEEEEEEEECCCCCCEEEHHEEEEEEEECCCCCHHHHHHHHHHHH
KDITGSFNAGIYMVAAFLVLGAVVVAFIPMKRMAVKKSLAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPDMNDSSSVLSPPSSTQDALDPRQQAVIKKLFRRLIVFLFILFVFSYLDRINIGFAGL
CCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TMGKDLGLTSTMFGLATTLFYVMYVICGIPSNIMLGIVGARRWIAVLMVVWGIASTATMF
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ATGPNSLYVLRMLVGIAEAGFLPGLLLYLTYWFPSQYRARANALFMIAMPVTMALGSLAS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEEEEEHHHHHHHHHHHHC
GYILNMDGLLNLKGWQWLFLLEGFPSVLLGLVVWFWLDDSPAKAKWLTDDDKACLNEMME
CEEEECCCCEECCCCEEEHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ADKRAIQQSRQNASVGMMSQRSMLRELFTPVIMLYTLAYFCLTNTLSALSVWTPLILQSF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQQSNNITIGLLSAIPQVCTIVGMVWWSKRSDRLNERKFHTLLPYLFAAAGWILTATSSN
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC
PMLQFSGIVMASAGAFAAMVIFWTTPDQSISVQARALGIAVINATGMTGAALGPLLMGWM
CCEEECCCCEECCCCCEEEEEEEECCCCCCEEEHHEEEEEEEECCCCCHHHHHHHHHHHH
KDITGSFNAGIYMVAAFLVLGAVVVAFIPMKRMAVKKSLAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]