Click here to switch to the map view.

The map label for this gene is ddg [H]

Identifier: 218548173

GI number: 218548173

Start: 809118

End: 810044

Strand: Reverse

Name: ddg [H]

Synonym: EFER_0790

Alternate gene names: 218548173

Gene position: 810044-809118 (Counterclockwise)

Preceding gene: 218548175

Following gene: 218548171

Centisome position: 17.65

GC content: 48.87

Gene sequence:

>927_bases
GTGTTTATGTTTCCTAAAAGTCAGTTTTCCCGCAAATTTTTGCACCCACGTTACTGGCTGACGTGGTTTGGTCTTGGCGT
CCTGTGGCTTCTTGTTCAGTTGCCTTATCCCGTTCTTTGTGCACTCGGTACGCGTACCGGTACTCTCGCACGCCCTTTTC
TCAAACGTCGTGAATCTATCGCCCGTAAAAACTTGCAACTGTGCTTCCCAAATCTTTCATCAGACGACAGAGAAAAGATG
ATTGATGAAAATTTCCGTTCACTTGGAATGGCGCTTCTGGAAACGGGGATGGCCTGGTTCTGGCCAGATCACCGGGTGCG
TAAATGGTTTGATGTTGACGGTCTGGAAAATTTACAACGTGCTCAGGCGCATAATCGCGGAGTAATGGTAGTCGGTGTGC
ATTTTATGTCACTGGAACTGGGCGGTCGCGTAATGGGACTGTGCCAGCCGATGATGGCAACGTATCGTCCACACAACAAT
CCGTTAATGGAGTGGGTACAAACTCGTGGCCGGATGCGTTCAAATAAAGCGATGATTAGCAGAAACAATTTGCGTGGCAT
CGTTGGCGCATTGAAAAAAGGCGAAGCCGTCTGGTTTGCCCCTGATCAAGACTATGGTCCAAAAGGCAGCTCCTTCGCGC
CGTTCTTTGCCGTCAAAAATGTTGCCACCACTAATGGTACGTTTGTTCTCTCACGTTTATCTGGTGCTGCGATGCTGACG
GTGACGATGGTGAGAAAGACCGATAACTTGGGTTATCGCCTGTTTATTACCCCGGAAATGGAAGGTTATCCGGCTGATGA
GTGTGAAGCGGCAGCCTTCATGAACAAAATTATTGAGCGTGAAATCATGCGTGCTCCAGAGCAATATCTCTGGATCCATC
GCCGTTTCAAAACTCGCCCTCTTGGAGAAACGTCACTCTACGTCTGA

Upstream 100 bases:

>100_bases
TCTTTGCAGGAACCATTGTCGTACATGATGGCCCAATAAACTGAGTGTACCGCTGCGGACATTACATCTTCTGCGATACA
ACAATCCGTGTTCTCAGAAG

Downstream 100 bases:

>100_bases
GTACGTTTTATTCAAAGAACAGTGTAAATGCGCCTATAACCATGATTTAAATATGGTTTTACAGGCGCATTTTTTTCATC
CCCCTAAGGCAAATTATTCC

Product: lipid A biosynthesis palmitoleoyl acyltransferase

Products: KDO2-(palmitoleoyl)-lipid IVA [C]

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MFMFPKSQFSRKFLHPRYWLTWFGLGVLWLLVQLPYPVLCALGTRTGTLARPFLKRRESIARKNLQLCFPNLSSDDREKM
IDENFRSLGMALLETGMAWFWPDHRVRKWFDVDGLENLQRAQAHNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNN
PLMEWVQTRGRMRSNKAMISRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKNVATTNGTFVLSRLSGAAMLT
VTMVRKTDNLGYRLFITPEMEGYPADECEAAAFMNKIIEREIMRAPEQYLWIHRRFKTRPLGETSLYV

Sequences:

>Translated_308_residues
MFMFPKSQFSRKFLHPRYWLTWFGLGVLWLLVQLPYPVLCALGTRTGTLARPFLKRRESIARKNLQLCFPNLSSDDREKM
IDENFRSLGMALLETGMAWFWPDHRVRKWFDVDGLENLQRAQAHNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNN
PLMEWVQTRGRMRSNKAMISRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKNVATTNGTFVLSRLSGAAMLT
VTMVRKTDNLGYRLFITPEMEGYPADECEAAAFMNKIIEREIMRAPEQYLWIHRRFKTRPLGETSLYV
>Mature_308_residues
MFMFPKSQFSRKFLHPRYWLTWFGLGVLWLLVQLPYPVLCALGTRTGTLARPFLKRRESIARKNLQLCFPNLSSDDREKM
IDENFRSLGMALLETGMAWFWPDHRVRKWFDVDGLENLQRAQAHNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNN
PLMEWVQTRGRMRSNKAMISRNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKNVATTNGTFVLSRLSGAAMLT
VTMVRKTDNLGYRLFITPEMEGYPADECEAAAFMNKIIEREIMRAPEQYLWIHRRFKTRPLGETSLYV

Specific function: Unknown

COG id: COG1560

COG function: function code M; Lauroyl/myristoyl acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the htrB/msbB family [H]

Homologues:

Organism=Escherichia coli, GI87082094, Length=306, Percent_Identity=87.2549019607843, Blast_Score=564, Evalue=1e-162,
Organism=Escherichia coli, GI1787292, Length=301, Percent_Identity=54.8172757475083, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1788161, Length=307, Percent_Identity=27.6872964169381, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004960
- InterPro:   IPR011920 [H]

Pfam domain/function: PF03279 Lip_A_acyltrans [H]

EC number: NA

Molecular weight: Translated: 35528; Mature: 35528

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFPKSQFSRKFLHPRYWLTWFGLGVLWLLVQLPYPVLCALGTRTGTLARPFLKRRESI
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH
ARKNLQLCFPNLSSDDREKMIDENFRSLGMALLETGMAWFWPDHRVRKWFDVDGLENLQR
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHHHHH
AQAHNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNPLMEWVQTRGRMRSNKAMIS
HHHHCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHC
RNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKNVATTNGTFVLSRLSGAAMLT
CCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEHHCCCEEEE
VTMVRKTDNLGYRLFITPEMEGYPADECEAAAFMNKIIEREIMRAPEQYLWIHRRFKTRP
EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LGETSLYV
CCCCCCCC
>Mature Secondary Structure
MFMFPKSQFSRKFLHPRYWLTWFGLGVLWLLVQLPYPVLCALGTRTGTLARPFLKRRESI
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH
ARKNLQLCFPNLSSDDREKMIDENFRSLGMALLETGMAWFWPDHRVRKWFDVDGLENLQR
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCHHHHHH
AQAHNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNPLMEWVQTRGRMRSNKAMIS
HHHHCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHC
RNNLRGIVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKNVATTNGTFVLSRLSGAAMLT
CCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEHHCCCEEEE
VTMVRKTDNLGYRLFITPEMEGYPADECEAAAFMNKIIEREIMRAPEQYLWIHRRFKTRP
EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
LGETSLYV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: KDO2-lipid IVA; palmitoleoyl-ACP [C]

Specific reaction: KDO2-lipid IVA + palmitoleoyl-ACP = KDO2-(palmitoleoyl)-lipid IVA + [acyl carrier protein] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]