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The map label for this gene is yfeD [H]

Identifier: 218548156

GI number: 218548156

Start: 787865

End: 788257

Strand: Reverse

Name: yfeD [H]

Synonym: EFER_0771

Alternate gene names: 218548156

Gene position: 788257-787865 (Counterclockwise)

Preceding gene: 218548157

Following gene: 218548151

Centisome position: 17.18

GC content: 46.31

Gene sequence:

>393_bases
ATGAAAATATTACGCAGCAAAATGACCACCAGGGAACTGGCTGATTTTACAGGGATGGCTAATCAGACCATTAATCGTTG
GATCCGGGAGAAGAAATGGAAAACGGAAAGATTTCCGGGGGTTAAAGGTGGACGAGCGAGACTCGTAGTGATTGATCATG
AGGTAAAAGAATTTCTTTACGGCGTTCCGGAAGTGCGAAAACGTTTATCACTTTCACTTGAAGAAGAGCCGCGTGCGGAC
TACACGCCTCAAGTGCACAGCCAGCCCTTCAGACAAATTCTGGATGCAGTGGAAAAGATGTCGCCAGTGGAACAAGAAAA
ACTTGCTTTGTTCCTTGCTCGTGAAGGGATTCGCAATTTTCTCGCCCGGCTTGATATTGACGAATCAGCGTAA

Upstream 100 bases:

>100_bases
GAGATGACGCCTGTAGAACAGAAACGAGTCACGTCACTACTTCTGCGCGAAGGCATCACCGGATTGTTACAACGCTTAGG
GATACGCGACAGCAAATAAT

Downstream 100 bases:

>100_bases
AAAAACGGCAGGGGTATTTCTCCTGCCGTTTATCTTTTATGCGCTAATTACTGCTGGTTTTCGCGTTCCGCAATAAAAGC
CAGCGCTTTGTTGATACGCT

Product: nucleic acid-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKILRSKMTTRELADFTGMANQTINRWIREKKWKTERFPGVKGGRARLVVIDHEVKEFLYGVPEVRKRLSLSLEEEPRAD
YTPQVHSQPFRQILDAVEKMSPVEQEKLALFLAREGIRNFLARLDIDESA

Sequences:

>Translated_130_residues
MKILRSKMTTRELADFTGMANQTINRWIREKKWKTERFPGVKGGRARLVVIDHEVKEFLYGVPEVRKRLSLSLEEEPRAD
YTPQVHSQPFRQILDAVEKMSPVEQEKLALFLAREGIRNFLARLDIDESA
>Mature_130_residues
MKILRSKMTTRELADFTGMANQTINRWIREKKWKTERFPGVKGGRARLVVIDHEVKEFLYGVPEVRKRLSLSLEEEPRAD
YTPQVHSQPFRQILDAVEKMSPVEQEKLALFLAREGIRNFLARLDIDESA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510963, Length=130, Percent_Identity=59.2307692307692, Blast_Score=161, Evalue=1e-41,
Organism=Escherichia coli, GI87082097, Length=123, Percent_Identity=36.5853658536585, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 15198; Mature: 15198

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILRSKMTTRELADFTGMANQTINRWIREKKWKTERFPGVKGGRARLVVIDHEVKEFLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECHHHHHHHC
GVPEVRKRLSLSLEEEPRADYTPQVHSQPFRQILDAVEKMSPVEQEKLALFLAREGIRNF
CCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LARLDIDESA
HHHCCCCCCC
>Mature Secondary Structure
MKILRSKMTTRELADFTGMANQTINRWIREKKWKTERFPGVKGGRARLVVIDHEVKEFLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECHHHHHHHC
GVPEVRKRLSLSLEEEPRADYTPQVHSQPFRQILDAVEKMSPVEQEKLALFLAREGIRNF
CCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LARLDIDESA
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2201776; 9205837; 9278503 [H]