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The map label for this gene is yfeC [H]

Identifier: 218548157

GI number: 218548157

Start: 788259

End: 788618

Strand: Reverse

Name: yfeC [H]

Synonym: EFER_0772

Alternate gene names: 218548157

Gene position: 788618-788259 (Counterclockwise)

Preceding gene: 218548159

Following gene: 218548156

Centisome position: 17.19

GC content: 47.22

Gene sequence:

>360_bases
ATGTTCAAGGAACGGATGACACCAGAAGAACTTGCTAATCTGACCGGCTTCAGTCGGCAGACTATCAATAAATGGGTAAG
GAAAGAGGGCTGGACCACTTCGCCAAAGCCTGGTGTGCAAGGAGGAAAAGCACGCCTGGTACATGTCAATGAACAGGTTC
GTGAATATATCCGTAATGCTGAACGTACGGAAGGTGCAACTCTTTTTACCAGCCATGCTGGCGATACTTCACTTGAGACA
CTTTTGATCACATTAGTGAAAGAGATGACGCCTGTAGAACAGAAACGAGTCACGTCACTACTTCTGCGCGAAGGCATCAC
CGGATTGTTACAACGCTTAGGGATACGCGACAGCAAATAA

Upstream 100 bases:

>100_bases
TAGCAACTCGCATTCAGTAGTTAAACTCGTCACGGTTTCATGTAAATTGATGTTATAAAATGAACCACTAATTACCCCTA
CAACCATTCAGGGAATCATT

Downstream 100 bases:

>100_bases
TATGAAAATATTACGCAGCAAAATGACCACCAGGGAACTGGCTGATTTTACAGGGATGGCTAATCAGACCATTAATCGTT
GGATCCGGGAGAAGAAATGG

Product: nucleic acid-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFKERMTPEELANLTGFSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERTEGATLFTSHAGDTSLET
LLITLVKEMTPVEQKRVTSLLLREGITGLLQRLGIRDSK

Sequences:

>Translated_119_residues
MFKERMTPEELANLTGFSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERTEGATLFTSHAGDTSLET
LLITLVKEMTPVEQKRVTSLLLREGITGLLQRLGIRDSK
>Mature_119_residues
MFKERMTPEELANLTGFSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERTEGATLFTSHAGDTSLET
LLITLVKEMTPVEQKRVTSLLLREGITGLLQRLGIRDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiI and P.aeruginosa rluD [H]

Homologues:

Organism=Escherichia coli, GI87082097, Length=114, Percent_Identity=82.4561403508772, Blast_Score=191, Evalue=1e-50,
Organism=Escherichia coli, GI226510963, Length=127, Percent_Identity=37.7952755905512, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 13479; Mature: 13479

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKERMTPEELANLTGFSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
ERTEGATLFTSHAGDTSLETLLITLVKEMTPVEQKRVTSLLLREGITGLLQRLGIRDSK
HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFKERMTPEELANLTGFSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
ERTEGATLFTSHAGDTSLETLLITLVKEMTPVEQKRVTSLLLREGITGLLQRLGIRDSK
HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]