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The map label for this gene is yfgC [H]

Identifier: 218548073

GI number: 218548073

Start: 697527

End: 698990

Strand: Reverse

Name: yfgC [H]

Synonym: EFER_0682

Alternate gene names: 218548073

Gene position: 698990-697527 (Counterclockwise)

Preceding gene: 218548075

Following gene: 218548072

Centisome position: 15.23

GC content: 51.84

Gene sequence:

>1464_bases
ATGTTCAGGCAGTTGAAAAAAAACCTGGTTGCAACGCTCATCGCAGCAATGACTATTGGTCAGGTGGCACCGGCATTTGC
CGATTCGGCTGATACCCTGCCGGATATGGGAACCTCAGCAGGAAGCACACTCTCTATCGGTCAGGAAATGCAGATGGGCG
ATTATTACGTCCGCCAGCTGCGAGGCAGCGCCCCACTGATAAACGATCCACTTCTTGATCAATACATCAATTCACTGGGT
ATGCGGCTGGTTTCACACGCCGACTCCGTAAAAACGCCCTTCCATTTCTATCTGATCAATAACGACGAAATTAACGCCTT
TGCTTTTTTTGGCGGCAATGTGGTGCTGCATTCGGCACTCTTTCGCTATGCCGATAACGAAAGCCAGTTAGCGTCGGTCA
TGGCCCACGAAATTTCTCACGTTACCCAGCGCCATTTGGCCCGCGCAATGGAAGATCAAAAGCGTAACGCTCCACTGACA
TGGGCCGGTGCGTTAGGCTCTATTTTACTGGCAATGGCCAGTCCGCAGGCAGGGATGGCAGCATTAACCGGTACACTGGC
GGGAACGCGTCAGGGGATGATCAGCTTTACGCAACAAAACGAACAAGAAGCTGACCGCATCGGTATTCAGGTACTGCAAC
GCTCGGGGTTTGATCCGCAGGCAATGCCAACGTTCCTTGAAAAACTGCTCGACCAGGCACGTTACTCTTCCCGGCCACCA
GAAATTTTGTTAACTCACCCATTGCCGGAAAGCCGTCTGGCAGATGCCCGCAACCGCGCTAATCAGATGCGCCCAATGGT
GACGCAATCGTCAGAGGATTTTTATCTGGCCAAAGCACGTACGCTGGGAATGTACAATTCCGGACGCAACCAGTTAACCA
ACGATCTTCTTGATGAATGGGCCAAAGGTAACATTCGCCAACAGCGGGCCGCGCAGTATGGTCGGGCGTTACAGGCAATG
GAAGGCAGTAAATATGGCGAAGCACGTATAATCCTCCAGCCACTGCTGACGGCAGAACCGAATAATGCCTGGTATCTTGA
TCTGGCAACGGATATTGATCTTGGTGAGAAAAAAGCCAGTGATGCGATTAATCGCCTGAAAAATGCCCGTGATTTGCGTA
CTAACCCGGTATTGCAGCTCAACCTCGCAAATGCTTACCTGCAAAGTGGGCAGCCACAGCAGGCGGCAACAATCCTGAAT
CGCTACACCTTTAACAATAAAGATGACGGCAATGGTTGGGATCTACTGGCACAGGCTGAAGCCGCGTTGAATAATCGCGA
TCAGGAACTGGCAGCACGGGCAGAAGGTTATGCCCTGGCGGGGCGTCTCGATCAGGCCATCTCCCTATTGAGCAGTGCCA
GTTCACAGGTCAAATTAGGCAGTCTGCAACAGGCCCGTTATGATGCTCGCATCGATCAGCTGCGCCAGCTGCAAGAACGC
TTTAAACCTTATACCAAGATGTAA

Upstream 100 bases:

>100_bases
GTCATGTGTTTTCAGGTTTACCCGCAAACCCTGGCGCAACGGGAACAATACTCCACAGCATGGGTCAAATGGTTATCTCA
AAAAATACAGGACAGAGGTT

Downstream 100 bases:

>100_bases
TTCGTATTAAAGGAAGAACAATGAACAAAACGGTAAAAATTTACCATAACCCTCGTTGCTCCAAGAGCCGTGAAACACTT
TCCTTGCTGAAGGAAAATGG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLDQYINSLG
MRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLT
WAGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP
EILLTHPLPESRLADARNRANQMRPMVTQSSEDFYLAKARTLGMYNSGRNQLTNDLLDEWAKGNIRQQRAAQYGRALQAM
EGSKYGEARIILQPLLTAEPNNAWYLDLATDIDLGEKKASDAINRLKNARDLRTNPVLQLNLANAYLQSGQPQQAATILN
RYTFNNKDDGNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER
FKPYTKM

Sequences:

>Translated_487_residues
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLDQYINSLG
MRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLT
WAGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP
EILLTHPLPESRLADARNRANQMRPMVTQSSEDFYLAKARTLGMYNSGRNQLTNDLLDEWAKGNIRQQRAAQYGRALQAM
EGSKYGEARIILQPLLTAEPNNAWYLDLATDIDLGEKKASDAINRLKNARDLRTNPVLQLNLANAYLQSGQPQQAATILN
RYTFNNKDDGNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER
FKPYTKM
>Mature_487_residues
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLDQYINSLG
MRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSALFRYADNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLT
WAGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP
EILLTHPLPESRLADARNRANQMRPMVTQSSEDFYLAKARTLGMYNSGRNQLTNDLLDEWAKGNIRQQRAAQYGRALQAM
EGSKYGEARIILQPLLTAEPNNAWYLDLATDIDLGEKKASDAINRLKNARDLRTNPVLQLNLANAYLQSGQPQQAATILN
RYTFNNKDDGNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER
FKPYTKM

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=487, Percent_Identity=94.8665297741273, Blast_Score=925, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53911; Mature: 53911

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
RGSAPLINDPLLDQYINSLGMRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCHHHHHHHH
FRYADNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLTWAGALGSILLAMASPQAGMA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHH
ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
EILLTHPLPESRLADARNRANQMRPMVTQSSEDFYLAKARTLGMYNSGRNQLTNDLLDEW
CEEEECCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHH
AKGNIRQQRAAQYGRALQAMEGSKYGEARIILQPLLTAEPNNAWYLDLATDIDLGEKKAS
HCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHH
DAINRLKNARDLRTNPVLQLNLANAYLQSGQPQQAATILNRYTFNNKDDGNGWDLLAQAE
HHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKPYTKM
HCCCCCC
>Mature Secondary Structure
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
RGSAPLINDPLLDQYINSLGMRLVSHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCHHHHHHHH
FRYADNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLTWAGALGSILLAMASPQAGMA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHH
ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
EILLTHPLPESRLADARNRANQMRPMVTQSSEDFYLAKARTLGMYNSGRNQLTNDLLDEW
CEEEECCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHH
AKGNIRQQRAAQYGRALQAMEGSKYGEARIILQPLLTAEPNNAWYLDLATDIDLGEKKAS
HCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCCCHHHHH
DAINRLKNARDLRTNPVLQLNLANAYLQSGQPQQAATILNRYTFNNKDDGNGWDLLAQAE
HHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKPYTKM
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]