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The map label for this gene is csiE [H]

Identifier: 218548028

GI number: 218548028

Start: 636193

End: 637473

Strand: Reverse

Name: csiE [H]

Synonym: EFER_0637

Alternate gene names: 218548028

Gene position: 637473-636193 (Counterclockwise)

Preceding gene: 218548029

Following gene: 218548026

Centisome position: 13.89

GC content: 47.46

Gene sequence:

>1281_bases
ATGATGCCAACCATCGCACCACTATCTGTACTTTCTGCTCCCCAACGCCGTTGTCATATATTGTTGACGCTGTTTCAACC
AGGTCTGGTGACGACCACGGAAACATTAAGTAAGTTAAATGGTGTCGATGTAGAGATTGTCAGTAAAGATCTTAATGAGA
CGAGTCGGGAGATTGCTGGTTACCACCAGCTGACGATCAAAACGGCCCAAAACGGCGGTTTTCGGATTGAAGGTACAGAG
CTCAATCAGCGTTTATGCCTGTTACATTGGTTACGCCGAGGGCTGCGCCTGTGCCCCGCATTTATTAATGAGCAATTTAC
CCCGGCATTAAAAAATGCGCTTAAACAATGCGGTATTGAACGAACTTTGTATGACGATACAAATTTACGCGCACTGATTA
ACCTCTGCGCCCGTCGCCTGAACATGCAGTTTGGTGATCGGGATATGCAGTTTCTACAGCTGTTCTGGCAATACTGTCTG
TTGAATCATCATGCAGGACAAACTCCTGATTTCACGCCACTTCAGCAACAGTGGATGCAGTCATGTGCAGCCTGGCCCTT
TGCGCTGGAATTAAGCCGTTTTTTACACCGCCGTGCGATGCGCAATGTTCCACGGGAAGAGTCGTTATTTATCGCCCTGC
TATTTACCCTGCTACGTGTTCCCGATCCCCGACGAGACAACCATCCATGGGACTGGCAGATGCGCAATGCTATTTCTCGC
CTGGTGCTTATTTTTCGCCAGAAAGGTAATGTCCAGTTTCGCGATGAGCAAGGACTACACGATCAACTTTACGTGCATCT
GGCGCAGGCGTTGCATCGTAGCTTGTTTTCTATTGGTATTGATAACACCTTACCTGACGGTTTTTGTCATCTTTATCCCC
GTTTAATGCGTACGACTCAGGAAGCGTTGACCGAATTTGCCAATGAATACGACCTTCAATTTTCTGAAGAAGAAACAGGA
CTGGTGGCGGTTATTTTTGGAGCGTGGTTGATGCAGGAAAATGATCTACACGAAAAACAGATCCTGATGCTGACAGACAA
CGATACTGAGCGCGAGGCGTGTATTGAGCAGCAGCTGCGAGAACTCACACTACTGCCGCTCAATATCCGGCATATGCCCG
TAAAGAATTTTTTAGTACAAGGTGCCCCACGTAACGTGGCGTTGATTGTTACACCTTACACCACCACGTTACCGCTATTT
TCACCCCCACTAATTTATGCAGACCAGACCTTGACGCCTCATCAACAACAGCAGATCCGCAAAATAGTCGAATCAGGTTG
A

Upstream 100 bases:

>100_bases
TGTGACCTTCCCCCGTATTCTGGTGCAAAGCGTTTCAATCATCATTTTTATAAATAAACTTTAGCTATTCTTATCAAACC
ACGAACGGGAGATCTGACAG

Downstream 100 bases:

>100_bases
AGGTGTAATTTTTGGCCGCAACACCATTGCAGGCAGTGCCAACAGCGCCATGACCCAGAATACGCCCCCCGCGAGATGTT
GATAGAGATAGCCCGCGAAA

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MMPTIAPLSVLSAPQRRCHILLTLFQPGLVTTTETLSKLNGVDVEIVSKDLNETSREIAGYHQLTIKTAQNGGFRIEGTE
LNQRLCLLHWLRRGLRLCPAFINEQFTPALKNALKQCGIERTLYDDTNLRALINLCARRLNMQFGDRDMQFLQLFWQYCL
LNHHAGQTPDFTPLQQQWMQSCAAWPFALELSRFLHRRAMRNVPREESLFIALLFTLLRVPDPRRDNHPWDWQMRNAISR
LVLIFRQKGNVQFRDEQGLHDQLYVHLAQALHRSLFSIGIDNTLPDGFCHLYPRLMRTTQEALTEFANEYDLQFSEEETG
LVAVIFGAWLMQENDLHEKQILMLTDNDTEREACIEQQLRELTLLPLNIRHMPVKNFLVQGAPRNVALIVTPYTTTLPLF
SPPLIYADQTLTPHQQQQIRKIVESG

Sequences:

>Translated_426_residues
MMPTIAPLSVLSAPQRRCHILLTLFQPGLVTTTETLSKLNGVDVEIVSKDLNETSREIAGYHQLTIKTAQNGGFRIEGTE
LNQRLCLLHWLRRGLRLCPAFINEQFTPALKNALKQCGIERTLYDDTNLRALINLCARRLNMQFGDRDMQFLQLFWQYCL
LNHHAGQTPDFTPLQQQWMQSCAAWPFALELSRFLHRRAMRNVPREESLFIALLFTLLRVPDPRRDNHPWDWQMRNAISR
LVLIFRQKGNVQFRDEQGLHDQLYVHLAQALHRSLFSIGIDNTLPDGFCHLYPRLMRTTQEALTEFANEYDLQFSEEETG
LVAVIFGAWLMQENDLHEKQILMLTDNDTEREACIEQQLRELTLLPLNIRHMPVKNFLVQGAPRNVALIVTPYTTTLPLF
SPPLIYADQTLTPHQQQQIRKIVESG
>Mature_426_residues
MMPTIAPLSVLSAPQRRCHILLTLFQPGLVTTTETLSKLNGVDVEIVSKDLNETSREIAGYHQLTIKTAQNGGFRIEGTE
LNQRLCLLHWLRRGLRLCPAFINEQFTPALKNALKQCGIERTLYDDTNLRALINLCARRLNMQFGDRDMQFLQLFWQYCL
LNHHAGQTPDFTPLQQQWMQSCAAWPFALELSRFLHRRAMRNVPREESLFIALLFTLLRVPDPRRDNHPWDWQMRNAISR
LVLIFRQKGNVQFRDEQGLHDQLYVHLAQALHRSLFSIGIDNTLPDGFCHLYPRLMRTTQEALTEFANEYDLQFSEEETG
LVAVIFGAWLMQENDLHEKQILMLTDNDTEREACIEQQLRELTLLPLNIRHMPVKNFLVQGAPRNVALIVTPYTTTLPLF
SPPLIYADQTLTPHQQQQIRKIVESG

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=426, Percent_Identity=67.3708920187793, Blast_Score=570, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 49376; Mature: 49376

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTIAPLSVLSAPQRRCHILLTLFQPGLVTTTETLSKLNGVDVEIVSKDLNETSREIAG
CCCCCCHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC
YHQLTIKTAQNGGFRIEGTELNQRLCLLHWLRRGLRLCPAFINEQFTPALKNALKQCGIE
HHEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
RTLYDDTNLRALINLCARRLNMQFGDRDMQFLQLFWQYCLLNHHAGQTPDFTPLQQQWMQ
CEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SCAAWPFALELSRFLHRRAMRNVPREESLFIALLFTLLRVPDPRRDNHPWDWQMRNAISR
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LVLIFRQKGNVQFRDEQGLHDQLYVHLAQALHRSLFSIGIDNTLPDGFCHLYPRLMRTTQ
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
EALTEFANEYDLQFSEEETGLVAVIFGAWLMQENDLHEKQILMLTDNDTEREACIEQQLR
HHHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH
ELTLLPLNIRHMPVKNFLVQGAPRNVALIVTPYTTTLPLFSPPLIYADQTLTPHQQQQIR
HHEECCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHH
KIVESG
HHHHCC
>Mature Secondary Structure
MMPTIAPLSVLSAPQRRCHILLTLFQPGLVTTTETLSKLNGVDVEIVSKDLNETSREIAG
CCCCCCHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC
YHQLTIKTAQNGGFRIEGTELNQRLCLLHWLRRGLRLCPAFINEQFTPALKNALKQCGIE
HHEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
RTLYDDTNLRALINLCARRLNMQFGDRDMQFLQLFWQYCLLNHHAGQTPDFTPLQQQWMQ
CEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SCAAWPFALELSRFLHRRAMRNVPREESLFIALLFTLLRVPDPRRDNHPWDWQMRNAISR
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LVLIFRQKGNVQFRDEQGLHDQLYVHLAQALHRSLFSIGIDNTLPDGFCHLYPRLMRTTQ
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
EALTEFANEYDLQFSEEETGLVAVIFGAWLMQENDLHEKQILMLTDNDTEREACIEQQLR
HHHHHHHHHCCCEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH
ELTLLPLNIRHMPVKNFLVQGAPRNVALIVTPYTTTLPLFSPPLIYADQTLTPHQQQQIR
HHEECCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHH
KIVESG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]