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The map label for this gene is yfdP [H]

Identifier: 218547972

GI number: 218547972

Start: 594243

End: 594923

Strand: Reverse

Name: yfdP [H]

Synonym: EFER_0577

Alternate gene names: 218547972

Gene position: 594923-594243 (Counterclockwise)

Preceding gene: 218547975

Following gene: 218547971

Centisome position: 12.96

GC content: 53.6

Gene sequence:

>681_bases
ATGCGGCTCAGCGCACGCGGGTTAAGGTTGAGGCTGACAGTCGACCTTCTGTGGATACCCACCCGTCTGGTGTGCAACCT
TCGCCAGGCACCGGGAGGCACCCGGCACCACAACTTTATGCTGTGTGTAGTCCTGGCGGTACCAGTTTGTACCCTTGCTT
CCGGCTGGTACCGTCCTTTTTACAAAACAGAGAAGAGCATCACCGGACGACGGGCTCATAACCCAATCCATCCGGGCGGC
AGTCACCGCAGGTGTTCTTCTCTGTTTTGTGGAGAAACTAACCGACCTTGCAGGGTCGATATGATGAGGAGCAGCAAAAT
GGCTAGCGAACGCAGTACTGATGTGCAGGCATTTATCGGGGAGCTGGACGGCGGCGTATTTGAAACCAAAATCGGCGCAG
TTCTCAGTGAAGTCGCTTCCGGTGTGATGAACACGAAAACCAAAGGTAAGGTCTCGCTCAACCTGGAAATCGAACCGTTT
GATGAGAACCGAGTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGCGGGAAAATTTCCGAAGAAGACAC
CACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAGTTACTGACTCTTG
CCGGTGAACCTGACGGAAAACTCCGCGCAGCAGGTCGTTAA

Upstream 100 bases:

>100_bases
TGTTGGGGAATAACCAGGTCCACCTCGCCTGATGTGGCTAAAAGCAGGCACATAACAGCTAAGTATTTTCAACCAGAGAG
AATTCTTAGCGTTGTGGTGA

Downstream 100 bases:

>100_bases
TATCGTTTTTAATTAACTGATTATTTATCTCATCACTGAATATCTTTATATAGTGAGGACTTATTATGTCTCAGAACTTA
GACGCAACCGCAATTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRLSARGLRLRLTVDLLWIPTRLVCNLRQAPGGTRHHNFMLCVVLAVPVCTLASGWYRPFYKTEKSITGRRAHNPIHPGG
SHRRCSSLFCGETNRPCRVDMMRSSKMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPF
DENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR

Sequences:

>Translated_226_residues
MRLSARGLRLRLTVDLLWIPTRLVCNLRQAPGGTRHHNFMLCVVLAVPVCTLASGWYRPFYKTEKSITGRRAHNPIHPGG
SHRRCSSLFCGETNRPCRVDMMRSSKMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPF
DENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR
>Mature_226_residues
MRLSARGLRLRLTVDLLWIPTRLVCNLRQAPGGTRHHNFMLCVVLAVPVCTLASGWYRPFYKTEKSITGRRAHNPIHPGG
SHRRCSSLFCGETNRPCRVDMMRSSKMASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPF
DENRVKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage T4 y06Q [H]

Homologues:

Organism=Escherichia coli, GI145693164, Length=119, Percent_Identity=99.1596638655462, Blast_Score=240, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25164; Mature: 25164

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSARGLRLRLTVDLLWIPTRLVCNLRQAPGGTRHHNFMLCVVLAVPVCTLASGWYRPF
CCCCCCCEEEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
YKTEKSITGRRAHNPIHPGGSHRRCSSLFCGETNRPCRVDMMRSSKMASERSTDVQAFIG
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHH
ELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRG
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCC
KISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR
CCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCEEECCC
>Mature Secondary Structure
MRLSARGLRLRLTVDLLWIPTRLVCNLRQAPGGTRHHNFMLCVVLAVPVCTLASGWYRPF
CCCCCCCEEEEEEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
YKTEKSITGRRAHNPIHPGGSHRRCSSLFCGETNRPCRVDMMRSSKMASERSTDVQAFIG
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHH
ELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVKIKHKLSYVRPTNRG
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCC
KISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR
CCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]