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The map label for this gene is yfdQ [H]

Identifier: 218547971

GI number: 218547971

Start: 593353

End: 594177

Strand: Reverse

Name: yfdQ [H]

Synonym: EFER_0576

Alternate gene names: 218547971

Gene position: 594177-593353 (Counterclockwise)

Preceding gene: 218547972

Following gene: 218547970

Centisome position: 12.95

GC content: 45.7

Gene sequence:

>825_bases
ATGTCTCAGAACTTAGACGCAACCGCAATTAATCAAATCCATGCCCTTATTTCTGCTCAGGGTGTTAATGAAATTATCAG
TAAGATTGGTGCCGATGCTGTGGCATTGCCTGAGAATTTCCGCATTCATGATCTGGAAAAATTTAATTTAAATCGCTTCC
GTTTCCGTGGTGCGCTTTCCACTGCCAGCATCGATGACTTTACCCGTTATTCTAAAGATCTTGCAGATGAAGGCACCCGC
TGCTTTATCGATGCTGATAATATGCGTGCCGTCAGTGTGCTTAACCTGGGTACTATTGATGAACCAGGTCACGCAGATAA
CACCGCCACACTCAAACTGAAAAAGACAGCACCGTTCTCTGCTCTGTTGTCTGTTAACGGCGAGCGTAACTCCCAGAAGT
CACTGGCAGAATGGATTGAAGACTGGGCCGACTATCTTGTGGGCTTTGATGCTAATGGTGACGCTATTCAGGCAACAAAA
GCGGCTGCGGCTGTCCGTAAAATCACGATTGAAGCAAACCAGACCGCTGATTTTGAAGATAATGACTTCAGCGGCAAACG
CTCCCTGATGGAGTCTGTCGAAGCGAAGACCAAAGACATTATGCCAGTGACATTTGAATTTAAATGCGTTCCGTTTGAAG
GTCTGAAAGAACGTCCGTTTAAATTACGCCTCAGTATTATCACTGGCGATCGTCCTGTACTGGTTCTGCGCATTATTCAG
CTGGAGGCGGTGCAGGAAGAAATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAGGACAGCAAAGTAGAAAC
CTTTATTGGTACTTTCACCGCCTGA

Upstream 100 bases:

>100_bases
AACCTGACGGAAAACTCCGCGCAGCAGGTCGTTAATATCGTTTTTAATTAACTGATTATTTATCTCATCACTGAATATCT
TTATATAGTGAGGACTTATT

Downstream 100 bases:

>100_bases
TTTCATTACTGCAAATGCCCCTGCGGGGGCATTTATGGAAACGTAATTTACTCAATAATCGCCGGATGGTGAGGGATTCT
TTTTACCAGAATTCAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTR
CFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATK
AAAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVTFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ
LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA

Sequences:

>Translated_274_residues
MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTR
CFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATK
AAAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVTFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ
LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA
>Mature_273_residues
SQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRC
FIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKA
AAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVTFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQL
EAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA

Specific function: Unknown

COG id: COG5532

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788702, Length=274, Percent_Identity=98.9051094890511, Blast_Score=554, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019276 [H]

Pfam domain/function: PF10065 DUF2303 [H]

EC number: NA

Molecular weight: Translated: 30473; Mature: 30342

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALS
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEEHHHCCCCCEEEECCCC
TASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFS
CCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCE
ALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAVRKITIEANQTADFED
EEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHEEEEEECCCCCCCCC
NDFSGKRSLMESVEAKTKDIMPVTFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEHHHHH
LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure 
SQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALS
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCEEEEHHHCCCCCEEEECCCC
TASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFS
CCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCE
ALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAVRKITIEANQTADFED
EEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHHEEEEEECCCCCCCCC
NDFSGKRSLMESVEAKTKDIMPVTFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEHHHHH
LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]