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The map label for this gene is ybbN [H]

Identifier: 218547947

GI number: 218547947

Start: 573041

End: 573895

Strand: Reverse

Name: ybbN [H]

Synonym: EFER_0550

Alternate gene names: 218547947

Gene position: 573895-573041 (Counterclockwise)

Preceding gene: 218547948

Following gene: 218547944

Centisome position: 12.51

GC content: 55.09

Gene sequence:

>855_bases
ATGTCCGTAGAAAATATTGTCAACATTAACGAATCTAATCTGCAACAGGTTCTTGAACAGTCGATGACCACACCGGTGCT
GTTCTATTTTTGGTCTGAACGTAGCCAGCACTGTTTGCAGTTAACCCCAATTCTGGAAAGCCTCGCGGCTCAGTACAACG
GGCAATTTATTCTGGCGAAGCTGGACTGCGACGCGGAGCAGATGATTGCCGCCCAGTTTGGTCTGCGCGCGATTCCGACC
GTGTATCTGTTCCAGAACGGGCAACCGGTAGACGGCTTCCAGGGGCCGCAACCGGAAGAGGCGATCCGCGCCCTGCTGGA
TAAAGTGCTGCCGCGCGAAGAAGAACTGAAAGCGCAGCAGGCGATGCAGCTGATGCAGGAAGGCAATTACACCGACGCCC
TGCCATTGCTGAAAGACGCCTGGCAGCTGTCGAATCAGAACGGGGAGATCGGCCTGCTGCTGGCAGAAACGCTGATTGCG
CTGAACCGTTCTGAAGATGCAGAAGCCGTGCTGAAAACCATTCCTTTGCAGGATCAGGACACCCGCTACCAGGGGCTGGT
GGCGCAAATTGAACTGCTGAAGCAGGCGGCAGATACACCGGAAATTCAACAGCTACAACAGCAGGTAGCGGAGAATCCAG
AAGATGCCGCACTGGCGACGCAACTGGCACTGCAACTGCATCAGGTTGGGCGCAATGAAGAGGCGCTGGAGTTGCTGTTT
GGGCATCTGCGTAAAGATCTCACCGCCGCAGACGGTCAGACACGTAAAACGTTCCAGGAGATCCTTGCTGCGCTGGGTAC
AGGTGATGCACTTGCGTCGAAGTATCGCCGCCAGCTGTATGCGTTGTTGTATTGA

Upstream 100 bases:

>100_bases
GCTGCCGGGGCGCGTGATGGACAAAATATTGCAAGGGTGAGTTGAAGCGCGCGCTTAAGCCCCCATGTCAAAGAAAATAT
CGACAACAGAGAGCGACTCC

Downstream 100 bases:

>100_bases
TTTTCCGTTGAAATGCGATGTGCTGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCCGCGCATAGCCG
CCGGATGCGGCGTGAACGCC

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPT
VYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF
GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY

Sequences:

>Translated_284_residues
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPT
VYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF
GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
>Mature_283_residues
SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV
YLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIAL
NRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFG
HLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=99.6478873239437, Blast_Score=568, Evalue=1e-163,
Organism=Escherichia coli, GI1788936, Length=105, Percent_Identity=30.4761904761905, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31761; Mature: 31630

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAK
CCCCHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ
ECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAK
CCCHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ
ECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
AMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]