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The map label for this gene is ybbJ [H]

Identifier: 218547943

GI number: 218547943

Start: 569900

End: 570358

Strand: Reverse

Name: ybbJ [H]

Synonym: EFER_0546

Alternate gene names: 218547943

Gene position: 570358-569900 (Counterclockwise)

Preceding gene: 218547944

Following gene: 218547936

Centisome position: 12.43

GC content: 57.08

Gene sequence:

>459_bases
ATGATCGAGATGATAGCTATCCATCCGCATATTTTTTGGCTAAGTCTCGGCGGTTTGTTGCTGGCTGCCGAGATGCTGGG
CGGCAATGGTTATCTGTTGTGGAGCGGTGTCGCGGCAGTGATTACTGGCCTGGTGGTCTGGTTGCTGCCGCTGGGCTGGG
AATGGCAAGGGGTGATGTTTGCCATCCTGACGCTGCTCGCCGCCTGGCTGTGGTGGAAATGGTTGTCGCGACGGGTTCGC
GAACAAAAGCACAGCGACAGTCATCTTAACCAGCGCGGGCAGCAGCTGATTGGCCGACGTTTTGTGCTGGAATCACCGCT
GGTCAATGGGCGCGGTCATATGCGCGTCGGCGACAGTTCCTGGCCCGTCAGCGCCAGCGAGGATTTAGCCGCAGGTACGC
ATGTTGAGGTGATTGCGATAGAAGGGATAACCCTACATATTCGAGCCGTCTCGTCTTAA

Upstream 100 bases:

>100_bases
GCAAAGTAGTAATGATGCCATTAGAGGCCAGCAGCCTGATGGGGTCGATTGCCGGGATTGCTGAACTGGTGAAAGACAGC
GCGAACGAGCGAAATAAATC

Downstream 100 bases:

>100_bases
TCACCCTGCCCGATGATGACAGCAGCCAGAGAGATTTTCGATAATCGGGCAATCGGCGCTGTCATCGCCAGGGCAGGCAT
TCGCCAGTGCCAGCAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIEMIAIHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMFAILTLLAAWLWWKWLSRRVR
EQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLAAGTHVEVIAIEGITLHIRAVSS

Sequences:

>Translated_152_residues
MIEMIAIHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMFAILTLLAAWLWWKWLSRRVR
EQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLAAGTHVEVIAIEGITLHIRAVSS
>Mature_152_residues
MIEMIAIHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMFAILTLLAAWLWWKWLSRRVR
EQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLAAGTHVEVIAIEGITLHIRAVSS

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=152, Percent_Identity=95.3947368421053, Blast_Score=269, Evalue=7e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16935; Mature: 16935

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMIAIHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMF
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHCCCCCCHHHHH
AILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
WPVSASEDLAAGTHVEVIAIEGITLHIRAVSS
CCCCCCCCCCCCCEEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MIEMIAIHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMF
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHHHHHHHHCCCCCCHHHHH
AILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
WPVSASEDLAAGTHVEVIAIEGITLHIRAVSS
CCCCCCCCCCCCCEEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]