| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yfiQ [H]
Identifier: 218547889
GI number: 218547889
Start: 490308
End: 492968
Strand: Reverse
Name: yfiQ [H]
Synonym: EFER_0489
Alternate gene names: 218547889
Gene position: 492968-490308 (Counterclockwise)
Preceding gene: 218547890
Following gene: 218547888
Centisome position: 10.74
GC content: 53.81
Gene sequence:
>2661_bases ATGAGTCAGCGAGGACTGGAAGCATTACTGCGACCAAAATCGATTGCGGTAATTGGCGCATCGATGAAACCCAATCGCGC AGGTTACCTGATGATGCGTAACCTGCTGGCGGGGGGATTTAACGGGCCGGTACTCCCGGTGACGCCTGCCTGGAAAGCGG TGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCCTGCCCTTTACACCCGATCTTGCGGTTTTATGTACCAATGCCAGC CGCAATCTTGCTCTTCTGGAAGAGCTCGGCGAGAAAGGCTGTAAAACCTGCATTATTCTTTCCGCCCCGGCATCGCAACA CGAAGATCTCCGCGCCTGCGCCCTGCGCCATAACATGCGTCTGCTGGGGCCAAACAGTCTGGGATTACTGGCCCCCTGGC AAGGCCTGAATGCCAGCTTTTCGCCTGTGCCGATTAAACGCGGCAAGCTGGCGTTTATTTCGCAGTCTGCCGCCGTCTCC AATACCATCCTCGACTGGGCACAACAGCGGGAAATGGGCTTTTCCTACTTTATTGCTCTCGGCGAAAGCCTGGATATCGA CGTTGATGAATTGCTCGATTATCTGGCGCGCGACAGCAAAACCAGTGCAATCCTGCTCTACCTCGAACAATTAAGTGATG CGCGACGTTTTGTTTCGGCTGCACGTAGCGCCTCACGTAATAAACCGATTCTGGTGATTAAAAGTGGACGTAGCCCGGCG GCGCAACGACTACTGAACACCACGGCAGGAATGGATCCTGCTTGGGATGCAGCTATTCAGCGCGCCGGTTTGTTGCGAGT ACAGGATACCCACGAGCTGTTTTCGGCAGTCGAAACCCTTAGCCATATGCGCCCGCTACGTGGAGAGCGGCTGATGATTA TCAGCAACGGTGCAGCACCTGCCGCACTGGCGCTGGATGCCTTATGGTCACGCAATGGCAAGCTGGCAACGCTAAGCGAA GAAACCTGCCAGAAGCTACGCGATACGCTGCCAGAACATGTAGCAATCTCTAACCCGCTCGATCTGCGCGATGACGCCAG CAGTGAGCATTATATTAAAACGCTGGATATTCTGCTCCACAGTCAGGATTTTGATGCGCTGATGGTTATTCATTCGCCCA GCGCCGCTGCTCCCGCAACAGAAAGCGCGCATGCATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAGTATGTTTCT CTGCTGACGAATTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCG CACCCCGGAAGGAACCATCACCGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGG CGTTGCCCAGCAATCTGACCTCTAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGTCG CTTGATACCCATGAGGTTCAGCCCATCCTGCAAGCGTATGGCATGAACACGCTCCCCACCTGGATTGCCAGCGATAGCAC CGAGGCTGTGCATATTGCCGAACAGATTGGTTATCCGGTGGCGCTGAAATTGCGTTCGCCGGATATTCCACATAAGTCGG AAGTTCAGGGCGTCATGCTCTACCTGCGTACAGCTAATGAAGTCCAGCAAGCCGCAAATGCTATTTTCGATCGCGTAAAA ATGGCCTGGCCGCAGGCGCGTATCCACGGCCTGCTGGTACAAAGTATGGCTAACCGTGCTGGCGCTCAGGAGTTGCGAGT AGTGGTTGAGCACGATCCGGTTTTCGGACCGTTGATCATGCTGGGCGAAGGCGGTGTGGAGTGGCGTCCTGAGGATCAAG CCGTCGTCGCACTACCGCCGCTGAACATGAACCTGGCACGTTATCTGGTCATTCAGGGGATCAAAAGTAAAAAGATTCGT GCACGTAGTGCGCTACGCCCGCTGGATGTGGCGGGATTAAGCCAGTTACTGGTGCAGGTTTCTAACTTGATTGTCGATTG TCCGGAGATTCAGAGGCTGGATATTCATCCTTTGCTGGCTTCCGGCAATGAATTTACCGCGCTTGATGTCACGCTGGATA TCGCTCCGTTTGAAGGCGATAACGAGAGTCGCCTGGCAGTCCGCCCTTATCCACATCAGCTGGAAGAATGGGTAGAATTG AAAAACGGCGAACGTTGCTTGTTCCGCCCGATTTTGCCAGAAGATGAGCCACAGCTTCAGCAATTCATTTCGCGAGTCAC CAAAGAAGATCTTTATTACCGCTACTTTAGCGAGATCAACGAATTTACCCATGAAGATTTAGCCAACATGACGCAGATCG ACTACGATCGGGAAATGGCGTTTGTAGCGGTACGACGTATTGATCAAACGGAAGAGATCCTCGGCGTCACGCGTGCGATC TCCGATCCTGATAACATCGATGCCGAATTTGCCGTGCTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTT AATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTGCAACGTCTGAATGGTATTACGATGCCAAACAATCGTGGCA TGGTGGCGCTGGCCCGCAAGCTCGGGTTTAACGTTGATATCCAGCTCGAAGAGGGGATCGTTGGGCTTACGCTAAATCTT GCCCAGCGCGAGGAATCATGA
Upstream 100 bases:
>100_bases ACACGCTATCTGGCAGGAAAAACGCAACATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAAAATCATTCGGT CACTTCTGCGGGAGACCGAT
Downstream 100 bases:
>100_bases GTAAGGTACTGGAAATGTTGACCACTTAATCGGGACTGGTGTTATTATTGCCCGCTTATGTCGTCTGCATTGCACAGAGG ACCCTTCAATGAACAGAGAA
Product: acyl-CoA synthetase NAD(P)-binding subunit/ATP-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 886; Mature: 885
Protein sequence:
>886_residues MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNAS RNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS NTILDWAQQREMGFSYFIALGESLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLMIISNGAAPAALALDALWSRNGKLATLSE ETCQKLRDTLPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAHALIEAVKHHPRSKYVS LLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVK MAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIR ARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGNEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAI SDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNL AQREES
Sequences:
>Translated_886_residues MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNAS RNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS NTILDWAQQREMGFSYFIALGESLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLMIISNGAAPAALALDALWSRNGKLATLSE ETCQKLRDTLPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAHALIEAVKHHPRSKYVS LLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVK MAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIR ARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGNEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAI SDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNL AQREES >Mature_885_residues SQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASR NLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSN TILDWAQQREMGFSYFIALGESLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPAA QRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLMIISNGAAPAALALDALWSRNGKLATLSEE TCQKLRDTLPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAHALIEAVKHHPRSKYVSL LTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATSL DTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKM AWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRA RSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGNEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVELK NGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAIS DPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLA QREES
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=886, Percent_Identity=98.9841986455982, Blast_Score=1800, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 98054; Mature: 97923
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW CCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCE LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE GESLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLMIISNGAAP HHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH AALALDALWSRNGKLATLSEETCQKLRDTLPEHVAISNPLDLRDDASSEHYIKTLDILLH HHHHHHHHHCCCCCEEECCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHC SQDFDALMVIHSPSAAAPATESAHALIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHH YLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCEEE LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV EECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH SNLIVDCPEIQRLDIHPLLASGNEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL HHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHH KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES HHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEHHCCCCC >Mature Secondary Structure SQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW CCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCE LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE GESLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGERLMIISNGAAP HHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCH AALALDALWSRNGKLATLSEETCQKLRDTLPEHVAISNPLDLRDDASSEHYIKTLDILLH HHHHHHHHHCCCCCEEECCHHHHHHHHHCCCHHEECCCCCCCCCCCCCCHHHHHHHHHHC SQDFDALMVIHSPSAAAPATESAHALIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML CCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHH YLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCEEE LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV EECCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH SNLIVDCPEIQRLDIHPLLASGNEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL HHHHCCCCCCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHH KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES HHHCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]