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The map label for this gene is gerD [H]

Identifier: 218235173

GI number: 218235173

Start: 148400

End: 149017

Strand: Reverse

Name: gerD [H]

Synonym: BCB4264_A0170

Alternate gene names: 218235173

Gene position: 149017-148400 (Counterclockwise)

Preceding gene: 218235681

Following gene: 218234814

Centisome position: 2.75

GC content: 35.28

Gene sequence:

>618_bases
ATGAAACGGATGCTATTCATTTTCGTTTCTTCTTTTCTACTTATCGCACTTGCAGCATGCGCACAAGGAAAAGAAACGAA
ATCCGAACTAGATTACGATCAAACAAAGAAAATGATTGTTGATATTTTAAAAACAGATCAAGGTAAGAAAGCTATTCAAG
ATGTATTAACTGATGAAAAAATGAAACAAGCACTCATACTAGATGAAACAGTAGTAAAGAAAACGATTGAAGATGCCATG
GTATCCGATAAAGGGCAACAATTCTGGGAAAAGCTCTTTAAAGATCCTAAGTTCTCATCAAAATTTGCTAAAAGTATGGG
GAAAGAACAAACTCAATTAATGAAAACCTTATTAAAAGACCCTGAATACCAAGCAGGCGTTATAGAAATTATGAAAAATC
CTGAAGTAGAAAAAATGATGTTACAAACAATGAAGAGTAAAGAATACCGTCAATATCTACAACAAGTACTAACAGAAACT
GCTGAAAGTCCACTCTTCCAAGCCAAGATGATTGATATCATTAGTAAAGGTGTGCAAAAAGCTGAAAAAGGCGGATCTGG
TAAGAAAGAAGCAGGCGGTGACGGTGGTTCTCAAGGCGACAAGAAGGAAGAACAGTAA

Upstream 100 bases:

>100_bases
TATCAATGACAATTTCAAAAAGCTAGCCATGTTCATGTATAAATTCCTTAAAGATATTTATATTAAAAAGAGAGAACTGT
GCTGAAAGGAGTTCCAACTT

Downstream 100 bases:

>100_bases
AAAATAATAACTATAATAACGAGTGGACAATTTATATATTGTTCACTCGTTATTACTTTATCTTGCTATTAACAGACAAA
ATGGACCCCTCTAATTAAGC

Product: spore germination protein GerD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKRMLFIFVSSFLLIALAACAQGKETKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM
VSDKGQQFWEKLFKDPKFSSKFAKSMGKEQTQLMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET
AESPLFQAKMIDIISKGVQKAEKGGSGKKEAGGDGGSQGDKKEEQ

Sequences:

>Translated_205_residues
MKRMLFIFVSSFLLIALAACAQGKETKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM
VSDKGQQFWEKLFKDPKFSSKFAKSMGKEQTQLMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET
AESPLFQAKMIDIISKGVQKAEKGGSGKKEAGGDGGSQGDKKEEQ
>Mature_205_residues
MKRMLFIFVSSFLLIALAACAQGKETKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAM
VSDKGQQFWEKLFKDPKFSSKFAKSMGKEQTQLMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTET
AESPLFQAKMIDIISKGVQKAEKGGSGKKEAGGDGGSQGDKKEEQ

Specific function: May be involved in fructose recognition during germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23151; Mature: 23151

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMLFIFVSSFLLIALAACAQGKETKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MKQALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPKFSSKFAKSMGKEQTQLMKTLLKD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHCC
PEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTETAESPLFQAKMIDIISKGVQK
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AEKGGSGKKEAGGDGGSQGDKKEEQ
HHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRMLFIFVSSFLLIALAACAQGKETKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MKQALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPKFSSKFAKSMGKEQTQLMKTLLKD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHCC
PEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTETAESPLFQAKMIDIISKGVQK
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AEKGGSGKKEAGGDGGSQGDKKEEQ
HHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2517635; 8969501; 9384377; 8576055; 7559346 [H]