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The map label for this gene is nhaC1 [H]

Identifier: 218233134

GI number: 218233134

Start: 363881

End: 365302

Strand: Reverse

Name: nhaC1 [H]

Synonym: BCB4264_A0388

Alternate gene names: 218233134

Gene position: 365302-363881 (Counterclockwise)

Preceding gene: 218235324

Following gene: 218235072

Centisome position: 6.74

GC content: 37.97

Gene sequence:

>1422_bases
ATGAAAAAAGAAATACCTTTTGGAATAGCGATTATCCCTATTATCATTACCGTTGCAGTTATGATGGTTACAATTGTTGT
ATTAAAACAAACCCCTCACGTTCCACTTATTATTGGTACAACCGTTGCTTCTATTGTCGCTTGGCGTTACGGTTACAAAT
GGAATGATCTTGAAGAAGCAATGTATAAAGGGATTCGTCTTGCATTACCCGCTATCGTCATTATTATTCTTGTTGGCTTA
ACAATTGGTGCTTGGATTGGCGGTGGAATCGTCGCAACGATGATTTATTACGGTTTAAAACTTTTAACTCCATCACTATT
TTTAGTTTCCATTACCGTCATTTGTTCTATCGTAGCATTAGCAATTGGTAGCTCTTGGTCTACAATGGGCACAATTGGTG
TTGCTGGAATGGGAATTGGCCTAAGTATGGGAATTCCAGCTCCAATGGTTGCTGGTGCCATTATTTCAGGCTCTTATTTT
GGCGATAAAATGTCACCGCTTTCAGACACAACTAACTTAGCCGCAGGATTAACAAATACAGATTTATTCGCACACATTCG
TCATATGTTATTTACTACAGTTCCAGGTTTAATTATTACTCTTATCGTCTACGCGGTCTTAGGAAGAAGCTTCGGCGCTA
ACAATATTGATGCGAAGAGCATCGATCAAACGTTACAAGTATTGCAACAAAACTTTGTTATCTCACCTTTCCTACTCATT
ATACCCGTAGTCGTTATGGTATTGGTCGCTAAAAAAGTCCCTGCCATACCAGCGATTCTCGTCGGTATTATTTTAGGATT
TTTATCACAAGTCTTTATTCAAGGTGGTTCTGTATCAGCATCTGTCGGTGCACTCCAAGTTGGATTTGTTATAGACACTG
GAAACAAACTAGTAGACGAACTATTTAACCGCGGTGGCTTAGATTCGATGATGAATACAGTCTCTATGACAATTGTCGCT
ATGACTTTCGGAGGAGTATTAGAACATACAGGTATTCTTCGCTCAATTGTAAATCAAATTTTAAAGTTAGCGAAATCAGC
AAAAGGGCTTATCGCTTCTACTATCGCATCTTGTTTCGCAACAAACCTTACTTGCTCTGAACAATATATTTCAATTGTTG
TCCCTTCAAGAATGTACGCAAATGCATACACAGAAAAAGGACTACATTCAAAAAACTTATCCAGAGCATTAGAAGATGGC
GGAACATTAACTTCTGTCTTCGTTCCTTGGAATACGTGCGGTGTATTTATTCTCGCTACACTTGGCGTAGGTGCATTTGA
ATATGCCCCTTATGCTATTTTGAATTTCATCGTACCTATTATCTCAATCATTTATGGTATAACAGGCTTCACAATTGTAA
AACTATCAGACATTGAAAAAGCAGAACTACTAAAGAAACAAAAAGCTCAACTAGAAGCTTAA

Upstream 100 bases:

>100_bases
TTGACGCTTACATAAACTTTTAGTTATCATAACCTAATAAACGTCTATTTTACGACAATTCTAAAAATACAAACAAACAT
ACGTAACAAGGAGGAACTTT

Downstream 100 bases:

>100_bases
AAATAGCGGTAAATTCAGTTCATATAGTGCGCGAGGTCGCCCTTGTTGATAGGGCATTTCCTCGCCGCAAATATGAGCAT
ACCCGTAATCAACTAATTTC

Product: Na+/H+ antiporter NhaC

Products: NA

Alternate protein names: Sodium/hydrogen antiporter; Sodium/proton antiporter [H]

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKKEIPFGIAIIPIIITVAVMMVTIVVLKQTPHVPLIIGTTVASIVAWRYGYKWNDLEEAMYKGIRLALPAIVIIILVGL
TIGAWIGGGIVATMIYYGLKLLTPSLFLVSITVICSIVALAIGSSWSTMGTIGVAGMGIGLSMGIPAPMVAGAIISGSYF
GDKMSPLSDTTNLAAGLTNTDLFAHIRHMLFTTVPGLIITLIVYAVLGRSFGANNIDAKSIDQTLQVLQQNFVISPFLLI
IPVVVMVLVAKKVPAIPAILVGIILGFLSQVFIQGGSVSASVGALQVGFVIDTGNKLVDELFNRGGLDSMMNTVSMTIVA
MTFGGVLEHTGILRSIVNQILKLAKSAKGLIASTIASCFATNLTCSEQYISIVVPSRMYANAYTEKGLHSKNLSRALEDG
GTLTSVFVPWNTCGVFILATLGVGAFEYAPYAILNFIVPIISIIYGITGFTIVKLSDIEKAELLKKQKAQLEA

Sequences:

>Translated_473_residues
MKKEIPFGIAIIPIIITVAVMMVTIVVLKQTPHVPLIIGTTVASIVAWRYGYKWNDLEEAMYKGIRLALPAIVIIILVGL
TIGAWIGGGIVATMIYYGLKLLTPSLFLVSITVICSIVALAIGSSWSTMGTIGVAGMGIGLSMGIPAPMVAGAIISGSYF
GDKMSPLSDTTNLAAGLTNTDLFAHIRHMLFTTVPGLIITLIVYAVLGRSFGANNIDAKSIDQTLQVLQQNFVISPFLLI
IPVVVMVLVAKKVPAIPAILVGIILGFLSQVFIQGGSVSASVGALQVGFVIDTGNKLVDELFNRGGLDSMMNTVSMTIVA
MTFGGVLEHTGILRSIVNQILKLAKSAKGLIASTIASCFATNLTCSEQYISIVVPSRMYANAYTEKGLHSKNLSRALEDG
GTLTSVFVPWNTCGVFILATLGVGAFEYAPYAILNFIVPIISIIYGITGFTIVKLSDIEKAELLKKQKAQLEA
>Mature_473_residues
MKKEIPFGIAIIPIIITVAVMMVTIVVLKQTPHVPLIIGTTVASIVAWRYGYKWNDLEEAMYKGIRLALPAIVIIILVGL
TIGAWIGGGIVATMIYYGLKLLTPSLFLVSITVICSIVALAIGSSWSTMGTIGVAGMGIGLSMGIPAPMVAGAIISGSYF
GDKMSPLSDTTNLAAGLTNTDLFAHIRHMLFTTVPGLIITLIVYAVLGRSFGANNIDAKSIDQTLQVLQQNFVISPFLLI
IPVVVMVLVAKKVPAIPAILVGIILGFLSQVFIQGGSVSASVGALQVGFVIDTGNKLVDELFNRGGLDSMMNTVSMTIVA
MTFGGVLEHTGILRSIVNQILKLAKSAKGLIASTIASCFATNLTCSEQYISIVVPSRMYANAYTEKGLHSKNLSRALEDG
GTLTSVFVPWNTCGVFILATLGVGAFEYAPYAILNFIVPIISIIYGITGFTIVKLSDIEKAELLKKQKAQLEA

Specific function: Na(+)/H(+) antiporter. Involved in pH homeostasis and sodium extrusion [H]

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nhaC Na(+)/H(+) antiporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004770
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 50161; Mature: 50161

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure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HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1660475; 9190799 [H]