Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213690962
Identifier: 213690962
GI number: 213690962
Start: 40920
End: 41390
Strand: Reverse
Name: 213690962
Synonym: Blon_0038
Alternate gene names: NA
Gene position: 41390-40920 (Counterclockwise)
Preceding gene: 213690971
Following gene: 213690961
Centisome position: 1.46
GC content: 53.93
Gene sequence:
>471_bases ATGCCTGCGTGGAATCCAAATTTGCGCTCCAAGAGTGTAATACGCACTTCAGATACCAGACATTTTGTCGATCCCTCCAT CGCAGCGGCAGCATTAGGAATCGGGCCAGCCAGCCTCATCAAAGATCTCGAGACTTTTGGACTGTTGTTTGAAAGTGTGT GCGTACGAGACTTCCGCGTATACGCAGACGCCCTCGATGGCGATGTGTTCCACTTCCGCGACAGAACTGGGCTTGAGTGC GATGCGGTCCTTCACCTGCGGGATGGCCGATACGGGCTCATCGAAGTCAAGCTGGGAGGGAACCGACTCATCGAAGAAGG TGCTGCCAACCTAATAAAGCTCGCCGACAAAATCGACACCACCACCATGTCAAAACCCAGTTTCCTTATGGTGGCGACAG GCACAGGTGAATACAGTTTCACCCGCCGAGACGGTGTCATGGTGGCCCCCATCAGAACGCTTAGACCATAG
Upstream 100 bases:
>100_bases TACAGGTCAACGGCCCTGCGCCGATCCTCCATCGAAAACATGCGGACTCCAATCCGGACGCCCAAGCGTCCAACTTTCCG TCCGCATCCCCTTATCGGAT
Downstream 100 bases:
>100_bases CATTGCCAGGGGTGAAACAACGGTTCTGCCAAAATCGGGCGTGTCAATCGATGCACGCCGTGATTTTGGCAGAACCGTTG TGTTCCAAGGGATATGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase-Like Protein; AAA+ Superfamily ATPase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPAWNPNLRSKSVIRTSDTRHFVDPSIAAAALGIGPASLIKDLETFGLLFESVCVRDFRVYADALDGDVFHFRDRTGLEC DAVLHLRDGRYGLIEVKLGGNRLIEEGAANLIKLADKIDTTTMSKPSFLMVATGTGEYSFTRRDGVMVAPIRTLRP
Sequences:
>Translated_156_residues MPAWNPNLRSKSVIRTSDTRHFVDPSIAAAALGIGPASLIKDLETFGLLFESVCVRDFRVYADALDGDVFHFRDRTGLEC DAVLHLRDGRYGLIEVKLGGNRLIEEGAANLIKLADKIDTTTMSKPSFLMVATGTGEYSFTRRDGVMVAPIRTLRP >Mature_155_residues PAWNPNLRSKSVIRTSDTRHFVDPSIAAAALGIGPASLIKDLETFGLLFESVCVRDFRVYADALDGDVFHFRDRTGLECD AVLHLRDGRYGLIEVKLGGNRLIEEGAANLIKLADKIDTTTMSKPSFLMVATGTGEYSFTRRDGVMVAPIRTLRP
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17171; Mature: 17040
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWNPNLRSKSVIRTSDTRHFVDPSIAAAALGIGPASLIKDLETFGLLFESVCVRDFRV CCCCCCCCCCCEEEEECCCCEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YADALDGDVFHFRDRTGLECDAVLHLRDGRYGLIEVKLGGNRLIEEGAANLIKLADKIDT HHHHCCCCEEEECCCCCCCEEEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC TTMSKPSFLMVATGTGEYSFTRRDGVMVAPIRTLRP CCCCCCCEEEEEECCCCEEEEECCCEEEECHHCCCC >Mature Secondary Structure PAWNPNLRSKSVIRTSDTRHFVDPSIAAAALGIGPASLIKDLETFGLLFESVCVRDFRV CCCCCCCCCCEEEEECCCCEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YADALDGDVFHFRDRTGLECDAVLHLRDGRYGLIEVKLGGNRLIEEGAANLIKLADKIDT HHHHCCCCEEEECCCCCCCEEEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC TTMSKPSFLMVATGTGEYSFTRRDGVMVAPIRTLRP CCCCCCCEEEEEECCCCEEEEECCCEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA