| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is quiA [H]
Identifier: 209550721
GI number: 209550721
Start: 3216620
End: 3218938
Strand: Direct
Name: quiA [H]
Synonym: Rleg2_3145
Alternate gene names: 209550721
Gene position: 3216620-3218938 (Clockwise)
Preceding gene: 209550718
Following gene: 209550722
Centisome position: 70.88
GC content: 61.49
Gene sequence:
>2319_bases ATGAAATTTCTGGCCAGCCTGTTTTTTATTGTTCTCGCCTTTATCGGATTGGGCCTGATAGGAGGCGGCGCCTTGCTGCT CAGCCTCGGCGGCTCGCCCTATTACGCGATCACCGGGCTTGCCTATCTGGCTGCCGCGCTTCTGCTGTGGCGCCGGCAGA TGTCAGGTGCGCTCATTGTCCTGCTTGTCGCCGTTCTCACCCTTCCCTGGGCACTATGGGAGTCGGGTTTCAATTTTTGG GCGCTCTTTGCGCGTTTGATGTCCCCCATCGCGCTGGCAGGCTTTTCACTTCTCTTTGCGCCGTCGCTGTCGCGAACCGC CAACCGGAAACTCTTCTATGGCGGCACCCTGCTTGCGGCCATCTTGTTCGCGGCGGGTTTCAGTCTTGCTTTCACGCCGC ATGGGCTGATCCGCCCTTCCGCCGATATCCCCGCCTACAAGACCGCCAAGGGCGACAACTCACCCTCCGACTGGACATCC TATGGCCGCAGCACGGCCGGAGATCGCTACTCCCCATTCGATCAGATCAACCGCGGCAATGTTGCCAAGCTCGATCTTGC CTGGACATACCGCACCGGGAAAAGCGATGGCGCCGATCAAAACACGCCGCTGCAGATCGGCGACACGATCTACACCTGCA CGCCGACGGACGTGATCGCAGCACTTGACGCAGATACGGGCAAGCCACGCTGGACCTTCGATCCCAAGGCAGCGGCGCCG TACTGGCAACGCTGCCGCGGCCTCGGTTACTACAGGATGCCATCGGAGGCCCAATCGGCCGACGGCCTTTGCAATGAGCG TCTGGTGCAGACGACGATCGATGCCCGCCTGCTGGAGATCGACAGCAAGACCGGCGCGCCCTGCAAGGGCTTCGGGGACA ATGGCACCGTGCAGCTCTCCCAGGGCATGGGTGAAGTCAAGTCAGGTTACTATTTCCAGACATCGGCACCGCTGATTGCC CGCAATCTGATTGTCATCGGAGGCTGGGTCATCGACAATCAGGAGGTAGGAGAACCCTCGGGCGTCATCCGCGCCTTCAA TGTCGTTACCGGCGAGCTCGAATGGGCATGGGATCTCGGCAATCCCGAGATCACCAAACTCCCGCCTGAGGGCCAGACCT ATACAAGGGCCACACCCAACATGTGGACGACGGCGGCATTCGACGACAAGCTCGGCCTCATCTATGCACCGCTCGGCAAT ACCACCCCGGATTATTACGGCGTCAATCGCCCGGCCTTCGCCGATCAATACAATGCCACCTTGGTAGCGCTCGATGTCAC GACGGGACGGGAGAGATGGAAGTTCCAGACCGTGCATCACGATATCTGGGACTATGACCTGCCGGCCCAGCCGGTTCTGC TCGACCTGCCCGATGGCAATGGCGCCACCGTGCCGGCTCTCCTGCAGACCACCAAACGCGGGCAGCTTTTCCTGCTCAAC CGTCAGACCGGTGCACCGCTTGCCGAGGTTCAGGAGAGGCCGGTGCCGCAGGAAGGCGGCGCGCCGGGGGAGAAATTGTC TCCGACGCAGCCCTATTCCGTCGGCATGCCGACGATCGGTGCGGAACGGGTGACGGAGCAGACGGCCTGGGGACTGACGA TGTTCGATCAGCTGGCATGCCGCATCGCCTTTCGAAAGATGCGCTACGACGGCGATTTCACCCCGATCGGCCCGCAATAT GCGATCCAGCAGCCGGGAAATCTTGGCGGTCTCAATTGGGGGAGCGTGTCGGTCGACCTGCCCAACAATCGGGTCTTCCT GAACGATATCCGCGTGCCCAGCCTCTTCGCACTCATTCCACGCGGGGAGTATGTCGATTTTGCCCTCACCACGACTGCGC ACGGCCCCTCCGCCCCGCAGCGCGGCACGCCCTACGGCATGGCCACCGAAATGTGGACCTCGAGGCTCCGCGTTCCCTGC ACGCAGCCGCCCTTCGGAACCGTCACCGCAGTGGATCTGAACACGCGCAAGATCGCATGGCAGGTCCCGGCCGGGACCGC CGAACAGCTCGGGCCGTTTAAGATCAAAACCAATCTGCCGATGCCGATGGGCCTGCCGAGTTATGCCGGTACGTCTGCCA CCGCCGGAGGCGTCGTCTTCTTCGCCGGTTTCCAGGACTATTACATCCGCGCTTACGACGCAGAGAACGGCGATGAGCTC TGGAAATATCCCCTGCCCGTCGGCTCGAGCGCCACGCCGATGACCTACGTCTCGCCGAAAACCGGCAAGCAATATGTGGT GATCTCGGTTGGCGGAGCGCCATATTCCAGGGACAACAGCGACTACGTGTTCGCCTTTTCTCTGAAAGACGAAGATTAG
Upstream 100 bases:
>100_bases AGGCAACTGACCACAACCCAATCGCCCTGCGCTTTCCGCGGCGCCTGCGACGGTTGGAGTTGGACCAGGCGATCGGGCGG CGAATTCAAATGAGGAAACC
Downstream 100 bases:
>100_bases CGCCGCTGCCGGTCACACTGTGCTATTTTGGTCCGATGAGGAACTGAGGCTACGAGCGTGACGCGAAAACTGGCGGCGAT CCTGGTCGCCGATGTAGTCG
Product: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
Products: NA
Alternate protein names: NAD(P)-independent quinate dehydrogenase [H]
Number of amino acids: Translated: 772; Mature: 772
Protein sequence:
>772_residues MKFLASLFFIVLAFIGLGLIGGGALLLSLGGSPYYAITGLAYLAAALLLWRRQMSGALIVLLVAVLTLPWALWESGFNFW ALFARLMSPIALAGFSLLFAPSLSRTANRKLFYGGTLLAAILFAAGFSLAFTPHGLIRPSADIPAYKTAKGDNSPSDWTS YGRSTAGDRYSPFDQINRGNVAKLDLAWTYRTGKSDGADQNTPLQIGDTIYTCTPTDVIAALDADTGKPRWTFDPKAAAP YWQRCRGLGYYRMPSEAQSADGLCNERLVQTTIDARLLEIDSKTGAPCKGFGDNGTVQLSQGMGEVKSGYYFQTSAPLIA RNLIVIGGWVIDNQEVGEPSGVIRAFNVVTGELEWAWDLGNPEITKLPPEGQTYTRATPNMWTTAAFDDKLGLIYAPLGN TTPDYYGVNRPAFADQYNATLVALDVTTGRERWKFQTVHHDIWDYDLPAQPVLLDLPDGNGATVPALLQTTKRGQLFLLN RQTGAPLAEVQERPVPQEGGAPGEKLSPTQPYSVGMPTIGAERVTEQTAWGLTMFDQLACRIAFRKMRYDGDFTPIGPQY AIQQPGNLGGLNWGSVSVDLPNNRVFLNDIRVPSLFALIPRGEYVDFALTTTAHGPSAPQRGTPYGMATEMWTSRLRVPC TQPPFGTVTAVDLNTRKIAWQVPAGTAEQLGPFKIKTNLPMPMGLPSYAGTSATAGGVVFFAGFQDYYIRAYDAENGDEL WKYPLPVGSSATPMTYVSPKTGKQYVVISVGGAPYSRDNSDYVFAFSLKDED
Sequences:
>Translated_772_residues MKFLASLFFIVLAFIGLGLIGGGALLLSLGGSPYYAITGLAYLAAALLLWRRQMSGALIVLLVAVLTLPWALWESGFNFW ALFARLMSPIALAGFSLLFAPSLSRTANRKLFYGGTLLAAILFAAGFSLAFTPHGLIRPSADIPAYKTAKGDNSPSDWTS YGRSTAGDRYSPFDQINRGNVAKLDLAWTYRTGKSDGADQNTPLQIGDTIYTCTPTDVIAALDADTGKPRWTFDPKAAAP YWQRCRGLGYYRMPSEAQSADGLCNERLVQTTIDARLLEIDSKTGAPCKGFGDNGTVQLSQGMGEVKSGYYFQTSAPLIA RNLIVIGGWVIDNQEVGEPSGVIRAFNVVTGELEWAWDLGNPEITKLPPEGQTYTRATPNMWTTAAFDDKLGLIYAPLGN TTPDYYGVNRPAFADQYNATLVALDVTTGRERWKFQTVHHDIWDYDLPAQPVLLDLPDGNGATVPALLQTTKRGQLFLLN RQTGAPLAEVQERPVPQEGGAPGEKLSPTQPYSVGMPTIGAERVTEQTAWGLTMFDQLACRIAFRKMRYDGDFTPIGPQY AIQQPGNLGGLNWGSVSVDLPNNRVFLNDIRVPSLFALIPRGEYVDFALTTTAHGPSAPQRGTPYGMATEMWTSRLRVPC TQPPFGTVTAVDLNTRKIAWQVPAGTAEQLGPFKIKTNLPMPMGLPSYAGTSATAGGVVFFAGFQDYYIRAYDAENGDEL WKYPLPVGSSATPMTYVSPKTGKQYVVISVGGAPYSRDNSDYVFAFSLKDED >Mature_772_residues MKFLASLFFIVLAFIGLGLIGGGALLLSLGGSPYYAITGLAYLAAALLLWRRQMSGALIVLLVAVLTLPWALWESGFNFW ALFARLMSPIALAGFSLLFAPSLSRTANRKLFYGGTLLAAILFAAGFSLAFTPHGLIRPSADIPAYKTAKGDNSPSDWTS YGRSTAGDRYSPFDQINRGNVAKLDLAWTYRTGKSDGADQNTPLQIGDTIYTCTPTDVIAALDADTGKPRWTFDPKAAAP YWQRCRGLGYYRMPSEAQSADGLCNERLVQTTIDARLLEIDSKTGAPCKGFGDNGTVQLSQGMGEVKSGYYFQTSAPLIA RNLIVIGGWVIDNQEVGEPSGVIRAFNVVTGELEWAWDLGNPEITKLPPEGQTYTRATPNMWTTAAFDDKLGLIYAPLGN TTPDYYGVNRPAFADQYNATLVALDVTTGRERWKFQTVHHDIWDYDLPAQPVLLDLPDGNGATVPALLQTTKRGQLFLLN RQTGAPLAEVQERPVPQEGGAPGEKLSPTQPYSVGMPTIGAERVTEQTAWGLTMFDQLACRIAFRKMRYDGDFTPIGPQY AIQQPGNLGGLNWGSVSVDLPNNRVFLNDIRVPSLFALIPRGEYVDFALTTTAHGPSAPQRGTPYGMATEMWTSRLRVPC TQPPFGTVTAVDLNTRKIAWQVPAGTAEQLGPFKIKTNLPMPMGLPSYAGTSATAGGVVFFAGFQDYYIRAYDAENGDEL WKYPLPVGSSATPMTYVSPKTGKQYVVISVGGAPYSRDNSDYVFAFSLKDED
Specific function: Can act either on quinate or on shikimate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=809, Percent_Identity=38.31891223733, Blast_Score=504, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017511 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.99.25 [H]
Molecular weight: Translated: 83914; Mature: 83914
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLASLFFIVLAFIGLGLIGGGALLLSLGGSPYYAITGLAYLAAALLLWRRQMSGALIV CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH LLVAVLTLPWALWESGFNFWALFARLMSPIALAGFSLLFAPSLSRTANRKLFYGGTLLAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECHHHHHH ILFAAGFSLAFTPHGLIRPSADIPAYKTAKGDNSPSDWTSYGRSTAGDRYSPFDQINRGN HHHHCCCEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCC VAKLDLAWTYRTGKSDGADQNTPLQIGDTIYTCTPTDVIAALDADTGKPRWTFDPKAAAP EEEEEEEEEEECCCCCCCCCCCCEEECCEEEEECCHHEEEEECCCCCCCCEEECCCCCCH YWQRCRGLGYYRMPSEAQSADGLCNERLVQTTIDARLLEIDSKTGAPCKGFGDNGTVQLS HHHHHCCCCEEECCCHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCEEEEC QGMGEVKSGYYFQTSAPLIARNLIVIGGWVIDNQEVGEPSGVIRAFNVVTGELEWAWDLG CCCCHHHCCEEEECCCCHHHCCEEEEEEEEECCCCCCCCCHHEEEEEEEECCEEEEEECC NPEITKLPPEGQTYTRATPNMWTTAAFDDKLGLIYAPLGNTTPDYYGVNRPAFADQYNAT CCCEEECCCCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE LVALDVTTGRERWKFQTVHHDIWDYDLPAQPVLLDLPDGNGATVPALLQTTKRGQLFLLN EEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCEEEEEE RQTGAPLAEVQERPVPQEGGAPGEKLSPTQPYSVGMPTIGAERVTEQTAWGLTMFDQLAC CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH RIAFRKMRYDGDFTPIGPQYAIQQPGNLGGLNWGSVSVDLPNNRVFLNDIRVPSLFALIP HHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECC RGEYVDFALTTTAHGPSAPQRGTPYGMATEMWTSRLRVPCTQPPFGTVTAVDLNTRKIAW CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEE QVPAGTAEQLGPFKIKTNLPMPMGLPSYAGTSATAGGVVFFAGFQDYYIRAYDAENGDEL ECCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC WKYPLPVGSSATPMTYVSPKTGKQYVVISVGGAPYSRDNSDYVFAFSLKDED EEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MKFLASLFFIVLAFIGLGLIGGGALLLSLGGSPYYAITGLAYLAAALLLWRRQMSGALIV CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH LLVAVLTLPWALWESGFNFWALFARLMSPIALAGFSLLFAPSLSRTANRKLFYGGTLLAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEECHHHHHH ILFAAGFSLAFTPHGLIRPSADIPAYKTAKGDNSPSDWTSYGRSTAGDRYSPFDQINRGN HHHHCCCEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCC VAKLDLAWTYRTGKSDGADQNTPLQIGDTIYTCTPTDVIAALDADTGKPRWTFDPKAAAP EEEEEEEEEEECCCCCCCCCCCCEEECCEEEEECCHHEEEEECCCCCCCCEEECCCCCCH YWQRCRGLGYYRMPSEAQSADGLCNERLVQTTIDARLLEIDSKTGAPCKGFGDNGTVQLS HHHHHCCCCEEECCCHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCEEEEC QGMGEVKSGYYFQTSAPLIARNLIVIGGWVIDNQEVGEPSGVIRAFNVVTGELEWAWDLG CCCCHHHCCEEEECCCCHHHCCEEEEEEEEECCCCCCCCCHHEEEEEEEECCEEEEEECC NPEITKLPPEGQTYTRATPNMWTTAAFDDKLGLIYAPLGNTTPDYYGVNRPAFADQYNAT CCCEEECCCCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE LVALDVTTGRERWKFQTVHHDIWDYDLPAQPVLLDLPDGNGATVPALLQTTKRGQLFLLN EEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCEEEEEE RQTGAPLAEVQERPVPQEGGAPGEKLSPTQPYSVGMPTIGAERVTEQTAWGLTMFDQLAC CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH RIAFRKMRYDGDFTPIGPQYAIQQPGNLGGLNWGSVSVDLPNNRVFLNDIRVPSLFALIP HHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECC RGEYVDFALTTTAHGPSAPQRGTPYGMATEMWTSRLRVPCTQPPFGTVTAVDLNTRKIAW CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEE QVPAGTAEQLGPFKIKTNLPMPMGLPSYAGTSATAGGVVFFAGFQDYYIRAYDAENGDEL ECCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC WKYPLPVGSSATPMTYVSPKTGKQYVVISVGGAPYSRDNSDYVFAFSLKDED EEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002591; 7592351 [H]