Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is cya3 [H]
Identifier: 209550722
GI number: 209550722
Start: 3218996
End: 3220792
Strand: Direct
Name: cya3 [H]
Synonym: Rleg2_3146
Alternate gene names: 209550722
Gene position: 3218996-3220792 (Clockwise)
Preceding gene: 209550721
Following gene: 209550724
Centisome position: 70.94
GC content: 63.11
Gene sequence:
>1797_bases GTGACGCGAAAACTGGCGGCGATCCTGGTCGCCGATGTAGTCGGCTACAGCCGCCTCGCCGGTGCGGACGAGGATCGCAT CCTGGCGCGGCTGAGAACCTTGCGCAGCGATCTGGTCGATCCCACCATCGCCGTGCACAATGGCCGTATCGTCAAGCGCA CCGGCGATGGAAGCCTCATCGAGTTTCGCAGCGTCGTCGACGCCGTGCGCTGCGCGATCGAGGTGCAGACTGCCATGGTC GAGCGCAATATCGGCGTGCCTCCCGAGCATCGCATCGAGTTCCGGGTCGGCATCCATCTGGGCGACGTCGTCGAGGAGAA CGACGGCGACCTGATGGGCGACGGCGTCAACATCGCCGCGCGGTTGGAGGGAGTTGCTGAGCCTGGCGCCATCTGCCTCT CCGAGGATGCCTACCGCCAGGTAAGAGCGCGACTTGAATGTGCCGTGACCGATCTCGGCAAAGTTCCCCTCAAAAATATC GCGGAGCCGATGCGGGTCTATTTGCTTCAGGTCGGAACCGCCTCGCAGCCGGTGTCGGCACCGCAACCGGGAGAGCAGCC GGCGCCGAGACGGCCTACGGCTGCAGCCGTTCCCGACAAGCCCTCCATCGCCGTACTGGCCTTCAACAATATGAGCGGCG ACGCCGAACAGGAATATTTCTCCGACGGGATCAGCGAGGACATCATCACCGACCTCTCCAAGCTGTCCGAATTGCACGTG ATCGCCCGCAACTCATCCTTCGTCTACAAGAATGTAACAGCCTCGGTACCTGAGATGGCTAAGGCGCTCGGCGTCCGTTA TGTCCTCGAAGGCAGTGTGCGCAAGGCCGGCAATCGCGTGCGTGTGACGGCCCAATTGATCGACGCCAGCAATGGCGGAC ATATCTGGGCCAGCCGCTACGATCGCGATCTCACCGACATTTTTGCGGTTCAGGATGAACTGACCCAGGAGATCGTCACA GCGCTGAAGCTCAATCTCACCCATGGCGACCAGGACCGCCTGGCCCAGGGGCGCGCCGTGGATGTCAGCGCTTACGAGCT GTTGTTGCGTGGCCGTGAGCAGGCGTCAGCTCATAACCGAACCGGAAATAGAGCCGCCCGCAGCCTGGCGGCAGACGCTC TCGCCGTCGACCCGGACTATGCGGCGGCCCGGGCCCTCATTTCGTTCACGCATGTGCTCGACTACGTCAACGCCTGGAGC GACGATCCGGAGGGCTCGCTGCGGACCGGGCTGGATCTCGCGCAGCAGGCAGTTGATATGGCCGAGGAACAGCCCAACAG CCACTTCGCACTGGGCATGGCCTGCATGTGGAACCACGAGCTCGACCGGGCGCGGGCAGAAGTGCTGCGCGGCCTGGCGC TGTCGCCCAACTCGGCCGAACTCCTGACACTGATGGCGCATATCCAGATATTCGCCGGCGATCCCGCAGGCGCCTTGGCA ACGCTCGATGCATCGATGCGGCTTGACCCGCACCATCCGGAACTTCTGTTCCAGTTTCTCGCCGATGCGCGCTTTTCTCT CGGTGAATATCAACAAGCCATCGCCGCGATCGAGCAGCGGCTCCAACAAAACGCGCAATCGGAAACGGCTTACGCCCTGC TGGCATCATGTTATGGCCATCTCGGCCGCGCGGAGGATGCCCGACAGGCGTGGGAGAAGGCGCTCCAGATCAACCCGGAC TTCTCCATCGAACGCCGCCGCCGCGTCCTGCCATTCCGAAACCCCGAGGACTTTAACCGCCGCGTCGAAGGACTCCGCAA GGCTGGACTGCTGGTTCCGGATCTCCGTCAAGGCTAA
Upstream 100 bases:
>100_bases CAGCGACTACGTGTTCGCCTTTTCTCTGAAAGACGAAGATTAGCGCCGCTGCCGGTCACACTGTGCTATTTTGGTCCGAT GAGGAACTGAGGCTACGAGC
Downstream 100 bases:
>100_bases CAGAAACTGCGGCTCAGACCGAAGTCGCATCGCCGCCTGTCGGTGGCCGCAGCATTCATTTTTTCCCGTCCGCCAGCGCC TCTTTCCCCCGGCGACGCGG
Product: adenylate/guanylate cyclase with TPR repeats
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MTRKLAAILVADVVGYSRLAGADEDRILARLRTLRSDLVDPTIAVHNGRIVKRTGDGSLIEFRSVVDAVRCAIEVQTAMV ERNIGVPPEHRIEFRVGIHLGDVVEENDGDLMGDGVNIAARLEGVAEPGAICLSEDAYRQVRARLECAVTDLGKVPLKNI AEPMRVYLLQVGTASQPVSAPQPGEQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHV IARNSSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRYDRDLTDIFAVQDELTQEIVT ALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNRTGNRAARSLAADALAVDPDYAAARALISFTHVLDYVNAWS DDPEGSLRTGLDLAQQAVDMAEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALA TLDASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGHLGRAEDARQAWEKALQINPD FSIERRRRVLPFRNPEDFNRRVEGLRKAGLLVPDLRQG
Sequences:
>Translated_598_residues MTRKLAAILVADVVGYSRLAGADEDRILARLRTLRSDLVDPTIAVHNGRIVKRTGDGSLIEFRSVVDAVRCAIEVQTAMV ERNIGVPPEHRIEFRVGIHLGDVVEENDGDLMGDGVNIAARLEGVAEPGAICLSEDAYRQVRARLECAVTDLGKVPLKNI AEPMRVYLLQVGTASQPVSAPQPGEQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHV IARNSSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRYDRDLTDIFAVQDELTQEIVT ALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNRTGNRAARSLAADALAVDPDYAAARALISFTHVLDYVNAWS DDPEGSLRTGLDLAQQAVDMAEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALA TLDASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGHLGRAEDARQAWEKALQINPD FSIERRRRVLPFRNPEDFNRRVEGLRKAGLLVPDLRQG >Mature_597_residues TRKLAAILVADVVGYSRLAGADEDRILARLRTLRSDLVDPTIAVHNGRIVKRTGDGSLIEFRSVVDAVRCAIEVQTAMVE RNIGVPPEHRIEFRVGIHLGDVVEENDGDLMGDGVNIAARLEGVAEPGAICLSEDAYRQVRARLECAVTDLGKVPLKNIA EPMRVYLLQVGTASQPVSAPQPGEQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHVI ARNSSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRYDRDLTDIFAVQDELTQEIVTA LKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNRTGNRAARSLAADALAVDPDYAAARALISFTHVLDYVNAWSD DPEGSLRTGLDLAQQAVDMAEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALAT LDASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGHLGRAEDARQAWEKALQINPDF SIERRRRVLPFRNPEDFNRRVEGLRKAGLLVPDLRQG
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 65401; Mature: 65270
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKLAAILVADVVGYSRLAGADEDRILARLRTLRSDLVDPTIAVHNGRIVKRTGDGSLI CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCHH EFRSVVDAVRCAIEVQTAMVERNIGVPPEHRIEFRVGIHLGDVVEENDGDLMGDGVNIAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHCCCCCCEECCCCEEEH RLEGVAEPGAICLSEDAYRQVRARLECAVTDLGKVPLKNIAEPMRVYLLQVGTASQPVSA HHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC PQPGEQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHEE IARNSSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRY EECCCCEEEECCCCCHHHHHHHHCHHHEECCHHHHCCCEEEEEEEEEECCCCCEEEHHHH DRDLTDIFAVQDELTQEIVTALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNR CCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCEECHHHHHHHHHCCHHHHHCCC TGNRAARSLAADALAVDPDYAAARALISFTHVLDYVNAWSDDPEGSLRTGLDLAQQAVDM CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALA HHHCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCEE TLDASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGH EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC LGRAEDARQAWEKALQINPDFSIERRRRVLPFRNPEDFNRRVEGLRKAGLLVPDLRQG CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TRKLAAILVADVVGYSRLAGADEDRILARLRTLRSDLVDPTIAVHNGRIVKRTGDGSLI CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCHH EFRSVVDAVRCAIEVQTAMVERNIGVPPEHRIEFRVGIHLGDVVEENDGDLMGDGVNIAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHCCCCCCEECCCCEEEH RLEGVAEPGAICLSEDAYRQVRARLECAVTDLGKVPLKNIAEPMRVYLLQVGTASQPVSA HHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC PQPGEQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHV CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHEE IARNSSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRY EECCCCEEEECCCCCHHHHHHHHCHHHEECCHHHHCCCEEEEEEEEEECCCCCEEEHHHH DRDLTDIFAVQDELTQEIVTALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNR CCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCCEECHHHHHHHHHCCHHHHHCCC TGNRAARSLAADALAVDPDYAAARALISFTHVLDYVNAWSDDPEGSLRTGLDLAQQAVDM CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALA HHHCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCCEE TLDASMRLDPHHPELLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGH EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC LGRAEDARQAWEKALQINPDFSIERRRRVLPFRNPEDFNRRVEGLRKAGLLVPDLRQG CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]