Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is exoM [H]
Identifier: 209550549
GI number: 209550549
Start: 3033449
End: 3034429
Strand: Direct
Name: exoM [H]
Synonym: Rleg2_2973
Alternate gene names: 209550549
Gene position: 3033449-3034429 (Clockwise)
Preceding gene: 209550548
Following gene: 209550550
Centisome position: 66.85
GC content: 59.33
Gene sequence:
>981_bases ATGAACCAGCAGCAAACATTCCCGCACTCATCCGTCGGCACCGATCAGGCAGGTGCACCGTTGAAGATCGCCGTCGGGGT ACTGACCTATCGGCGTCTGGACGGGATCGCCAAGCTGCTTGACGTCATGACGCGACAGATCAGGCACCCGGCCCGCCCCT TTCATCTCACCATGGTGATCGTCGACAATGATGCGGCCGGCAGCGCCAAGGCAACGGTGGAGGGCTTTGGCCAGACAGGC GCCTACGACCTGATCTACGTCGTCGAGCAAAACCAGGGCATCCCTTTTGCGCGCAATCGCGCGCTGGATTCGGCACCGCC CGGCACCGACCTCTTCTGCTTTCTCGACGATGACGAATGGCCGGTCGACGGCTGGCTGGACGCCATGCTGGAGACCCGCG AGAAAAACCGCGCCGATTGCGTCTACGGCCCCGTCCAGCCGGTCTATCCAGAAAATCCGCCGGAATATTTCATCAAGGCC AGAGTATTCGAGCGCAAGAAGAACATCGACGGCCAGCGCATCGGTTATGCGGCCTCGAACAACGTCATGTTCGACTATCC GCTGATCCGTTCATGGAATCTTCGTTTTGAGGAAAAGATGCGCTTCACCGGCGGCACGGACTATCTTTTCTTCAATCAGG CCATCCGCCGCGGCATGCAGATTTTCTGGGCTGACAAGGCCCTGGTCTACGACATCGTTCCCGCGAACCGGATGACCTGG AAATGGGTGTTGCAAAGACAGTACCGACTGGGCAATACCTTCGCCGTCAGCGAGGTTCTGCATGGCAACCTCAAGCGCAA GATCTATCGCGCCGCCTATGGCGCCACGAGGGTCGTGCTCGGACTGGTCATGCTGCCTACGATCTTGATTTCACCCTACT GGGGCATGCGCGCGCTCACCCATGTTCTGCGCGGCGCAGGCATGGTTAACGGGATCCTCGGACATGCCTATCAGGAATAC AAGCCCAATGCCGCCCACTGA
Upstream 100 bases:
>100_bases ACACGGTGACCGGCGGTCCGTTCGGCGATGCTGCCGCAACCGAGGTGGCCCTGATGGCGGCGCGCAAGCGTTTGGCAAAT ATGCTGCGGAAAGGACAGGC
Downstream 100 bases:
>100_bases TATTATTTGCGGAAGCGCTCTTGGAGACGTTCTGGCTCTTACTATGTTTCAGCCAAAAGCATCATGTCTAATAACATCGA TGAACTTGATGGCTTCAACC
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNQQQTFPHSSVGTDQAGAPLKIAVGVLTYRRLDGIAKLLDVMTRQIRHPARPFHLTMVIVDNDAAGSAKATVEGFGQTG AYDLIYVVEQNQGIPFARNRALDSAPPGTDLFCFLDDDEWPVDGWLDAMLETREKNRADCVYGPVQPVYPENPPEYFIKA RVFERKKNIDGQRIGYAASNNVMFDYPLIRSWNLRFEEKMRFTGGTDYLFFNQAIRRGMQIFWADKALVYDIVPANRMTW KWVLQRQYRLGNTFAVSEVLHGNLKRKIYRAAYGATRVVLGLVMLPTILISPYWGMRALTHVLRGAGMVNGILGHAYQEY KPNAAH
Sequences:
>Translated_326_residues MNQQQTFPHSSVGTDQAGAPLKIAVGVLTYRRLDGIAKLLDVMTRQIRHPARPFHLTMVIVDNDAAGSAKATVEGFGQTG AYDLIYVVEQNQGIPFARNRALDSAPPGTDLFCFLDDDEWPVDGWLDAMLETREKNRADCVYGPVQPVYPENPPEYFIKA RVFERKKNIDGQRIGYAASNNVMFDYPLIRSWNLRFEEKMRFTGGTDYLFFNQAIRRGMQIFWADKALVYDIVPANRMTW KWVLQRQYRLGNTFAVSEVLHGNLKRKIYRAAYGATRVVLGLVMLPTILISPYWGMRALTHVLRGAGMVNGILGHAYQEY KPNAAH >Mature_326_residues MNQQQTFPHSSVGTDQAGAPLKIAVGVLTYRRLDGIAKLLDVMTRQIRHPARPFHLTMVIVDNDAAGSAKATVEGFGQTG AYDLIYVVEQNQGIPFARNRALDSAPPGTDLFCFLDDDEWPVDGWLDAMLETREKNRADCVYGPVQPVYPENPPEYFIKA RVFERKKNIDGQRIGYAASNNVMFDYPLIRSWNLRFEEKMRFTGGTDYLFFNQAIRRGMQIFWADKALVYDIVPANRMTW KWVLQRQYRLGNTFAVSEVLHGNLKRKIYRAAYGATRVVLGLVMLPTILISPYWGMRALTHVLRGAGMVNGILGHAYQEY KPNAAH
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37011; Mature: 37011
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQQTFPHSSVGTDQAGAPLKIAVGVLTYRRLDGIAKLLDVMTRQIRHPARPFHLTMVI CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE VDNDAAGSAKATVEGFGQTGAYDLIYVVEQNQGIPFARNRALDSAPPGTDLFCFLDDDEW EECCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEECCCCC PVDGWLDAMLETREKNRADCVYGPVQPVYPENPPEYFIKARVFERKKNIDGQRIGYAASN CHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECEEECC NVMFDYPLIRSWNLRFEEKMRFTGGTDYLFFNQAIRRGMQIFWADKALVYDIVPANRMTW CEEEECCCEEECCCCCHHHEEECCCCCHHHHHHHHHCCCEEEEECCEEEEEECCCCCCHH KWVLQRQYRLGNTFAVSEVLHGNLKRKIYRAAYGATRVVLGLVMLPTILISPYWGMRALT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HVLRGAGMVNGILGHAYQEYKPNAAH HHHHHCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNQQQTFPHSSVGTDQAGAPLKIAVGVLTYRRLDGIAKLLDVMTRQIRHPARPFHLTMVI CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE VDNDAAGSAKATVEGFGQTGAYDLIYVVEQNQGIPFARNRALDSAPPGTDLFCFLDDDEW EECCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCEEEEEECCCCC PVDGWLDAMLETREKNRADCVYGPVQPVYPENPPEYFIKARVFERKKNIDGQRIGYAASN CHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECEEECC NVMFDYPLIRSWNLRFEEKMRFTGGTDYLFFNQAIRRGMQIFWADKALVYDIVPANRMTW CEEEECCCEEECCCCCHHHEEECCCCCHHHHHHHHHCCCEEEEECCEEEEEECCCCCCHH KWVLQRQYRLGNTFAVSEVLHGNLKRKIYRAAYGATRVVLGLVMLPTILISPYWGMRALT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH HVLRGAGMVNGILGHAYQEYKPNAAH HHHHHCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]