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The map label for this gene is yibD [C]

Identifier: 209550548

GI number: 209550548

Start: 3032568

End: 3033452

Strand: Direct

Name: yibD [C]

Synonym: Rleg2_2972

Alternate gene names: 209550548

Gene position: 3032568-3033452 (Clockwise)

Preceding gene: 209550547

Following gene: 209550549

Centisome position: 66.83

GC content: 60.11

Gene sequence:

>885_bases
ATGAAACTCTCCGTGCTGATCAACAATTTTAATTATGGGCAGTTCCTGCGCCCATGCATCGACAGCGTTCTGTCACAGGC
CTATCCCGACGTCGAGGTGATCGCGGTCGACGATGGCTCCACCGATGATTCCCGCGAGATTTTTGCCTCCTACGGGGATC
GGATTCTGGCTGTATTGAAGGAGAACGGCGGTCAGGCCTCGAGCTTCAATGCAGGTTTTGCGGCCGCGAGCGGCGATATC
CTGTTTCTCCTCGACGCCGACGATACGTTTTTGCCCGGCAAACTCGCGCGGATCGCCGAGATCTACGATCGCAACGAGAT
CGACTGGTGTTTCGACCGGGTGACGACCGAGAAAGGCGACCAGCCTTCTGCAGAACTGCAAGTGACGCTGTTCGACAAGC
GGGACACGCTTCGCAAAGGGGGCTTTCCCTCGCTTCCGGTTCCGACATCGGGCCTGAGCTTCCGCCGCAGCCTGCTCGCC
CAGATATTGCCGATGACCGTCGCGGCAGACGTCGTCCTCAGCGACAATTATATCAAGTTTGCCGCAGCCTATCTCGGTCG
TGGCGCCATCGTTGAAACACCGCTGACCTTCCAGCGCATTCATGAGTCGAACCGCTATACCGGCACAAGCCGGGCAAAGA
CGCTGCGCCCGCGGATCATGATCGCGACAGGTCTGGAACTGGCACGCCGATACGATGGGCTGCAGGCGCTCGGCAAGAGC
CTGGTGGCCGGCGGCATTGCCGAGACGACATCGCTGCTGAAGCTTAGGAGCGAAGCGCGAAACACGGTGACCGGCGGTCC
GTTCGGCGATGCTGCCGCAACCGAGGTGGCCCTGATGGCGGCGCGCAAGCGTTTGGCAAATATGCTGCGGAAAGGACAGG
CATGA

Upstream 100 bases:

>100_bases
CCATCTGGAAGTACTACTACATGCGTGGCTATCGCGCGGGACTTCGCCAATACGCACCGACAGGAAATCCCTCTTGCCGA
ATGACGCAGGAGATCGCGCG

Downstream 100 bases:

>100_bases
ACCAGCAGCAAACATTCCCGCACTCATCCGTCGGCACCGATCAGGCAGGTGCACCGTTGAAGATCGCCGTCGGGGTACTG
ACCTATCGGCGTCTGGACGG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKLSVLINNFNYGQFLRPCIDSVLSQAYPDVEVIAVDDGSTDDSREIFASYGDRILAVLKENGGQASSFNAGFAAASGDI
LFLLDADDTFLPGKLARIAEIYDRNEIDWCFDRVTTEKGDQPSAELQVTLFDKRDTLRKGGFPSLPVPTSGLSFRRSLLA
QILPMTVAADVVLSDNYIKFAAAYLGRGAIVETPLTFQRIHESNRYTGTSRAKTLRPRIMIATGLELARRYDGLQALGKS
LVAGGIAETTSLLKLRSEARNTVTGGPFGDAAATEVALMAARKRLANMLRKGQA

Sequences:

>Translated_294_residues
MKLSVLINNFNYGQFLRPCIDSVLSQAYPDVEVIAVDDGSTDDSREIFASYGDRILAVLKENGGQASSFNAGFAAASGDI
LFLLDADDTFLPGKLARIAEIYDRNEIDWCFDRVTTEKGDQPSAELQVTLFDKRDTLRKGGFPSLPVPTSGLSFRRSLLA
QILPMTVAADVVLSDNYIKFAAAYLGRGAIVETPLTFQRIHESNRYTGTSRAKTLRPRIMIATGLELARRYDGLQALGKS
LVAGGIAETTSLLKLRSEARNTVTGGPFGDAAATEVALMAARKRLANMLRKGQA
>Mature_294_residues
MKLSVLINNFNYGQFLRPCIDSVLSQAYPDVEVIAVDDGSTDDSREIFASYGDRILAVLKENGGQASSFNAGFAAASGDI
LFLLDADDTFLPGKLARIAEIYDRNEIDWCFDRVTTEKGDQPSAELQVTLFDKRDTLRKGGFPSLPVPTSGLSFRRSLLA
QILPMTVAADVVLSDNYIKFAAAYLGRGAIVETPLTFQRIHESNRYTGTSRAKTLRPRIMIATGLELARRYDGLQALGKS
LVAGGIAETTSLLKLRSEARNTVTGGPFGDAAATEVALMAARKRLANMLRKGQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=223, Percent_Identity=28.2511210762332, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31922; Mature: 31922

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSVLINNFNYGQFLRPCIDSVLSQAYPDVEVIAVDDGSTDDSREIFASYGDRILAVLK
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEC
ENGGQASSFNAGFAAASGDILFLLDADDTFLPGKLARIAEIYDRNEIDWCFDRVTTEKGD
CCCCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
QPSAELQVTLFDKRDTLRKGGFPSLPVPTSGLSFRRSLLAQILPMTVAADVVLSDNYIKF
CCCCEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHH
AAAYLGRGAIVETPLTFQRIHESNRYTGTSRAKTLRPRIMIATGLELARRYDGLQALGKS
HHHHHCCCCEEECCHHHHHHHHCCCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHHH
LVAGGIAETTSLLKLRSEARNTVTGGPFGDAAATEVALMAARKRLANMLRKGQA
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLSVLINNFNYGQFLRPCIDSVLSQAYPDVEVIAVDDGSTDDSREIFASYGDRILAVLK
CEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEC
ENGGQASSFNAGFAAASGDILFLLDADDTFLPGKLARIAEIYDRNEIDWCFDRVTTEKGD
CCCCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCC
QPSAELQVTLFDKRDTLRKGGFPSLPVPTSGLSFRRSLLAQILPMTVAADVVLSDNYIKF
CCCCEEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHH
AAAYLGRGAIVETPLTFQRIHESNRYTGTSRAKTLRPRIMIATGLELARRYDGLQALGKS
HHHHHCCCCEEECCHHHHHHHHCCCCCCCCHHHHHCCEEEEEHHHHHHHHHHHHHHHHHH
LVAGGIAETTSLLKLRSEARNTVTGGPFGDAAATEVALMAARKRLANMLRKGQA
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]