Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is ycdQ [C]
Identifier: 209550547
GI number: 209550547
Start: 3031597
End: 3032571
Strand: Direct
Name: ycdQ [C]
Synonym: Rleg2_2971
Alternate gene names: 209550547
Gene position: 3031597-3032571 (Clockwise)
Preceding gene: 209550546
Following gene: 209550548
Centisome position: 66.81
GC content: 54.87
Gene sequence:
>975_bases ATGACGGGTCCAAGGATTAGTGTGATCTTTTCGTCCTTTAACGGTGCCAGTAGACGGCTTCAACAGATGCTGGACTCCAT GCTCGCGCAAAACCTCTCAAGCGAGCAGTGGGAACTGATAGCCGTCAACAACAACAGCAATGATGAGACACAGCAGCTTC TCGATCGATATACGAAGAAGCTCTCAATGGTCGTTGTCAATCATGCCCGTCCAGGAAAATCAGGAGCTATGAATGCAGCT CTGGCGGTAGCTCGAGGCGCACTGATCGTTTTTACGGACGATGACATCGAGGCAGACGTGAATTGGTTGAGTGCGATCGT CGCATGCGCAGCGGCCAATCCGGATTTCGGAGTCATCGGCGGCCGCATTTTGCCGAACTGGGAGCATTATCCTCAGGGGG ATCCGCTGTTGGACTGGATTCCCATGGGATCGACCTTCGCCATAGCTGACGACGAATCCAGCGGCCTTTGCGACCCGACA AAAATTTGGGGCCCAAACACGACGGTGCGTCGCGAACTGCTTGGCAGCGATGTCCGGTTCCGTGAAGACATTGGCCCACT CCCAGGCGGTCTTTTTGCAATGGGAGAGGATACGGAAATCGTCAACCGTCTCTCCCGGAGCGGCGTGAAAACATATCGCT GCGCTGAGGCCATCGTCCATCATTGGATTCCGGCCTCCAGCGTTACAGAGGCTTGGGTGCAAAAACGTGGGGAACGTCTT GGCTATGGGATGCCGGCGCTTTTTGCTGAGGATATTCCCAAAGGTGTAAAGATTAGAGGAGTTCCCTTAAGGACCTGGGT TGAGAGCGCCAACTGGGCAGTTCGGGCAGCCCTTCTCTATCCCTTGCCGCGATCAAAAAAACGGTTCTGGGCCATCTGGA AGTACTACTACATGCGTGGCTATCGCGCGGGACTTCGCCAATACGCACCGACAGGAAATCCCTCTTGCCGAATGACGCAG GAGATCGCGCGATGA
Upstream 100 bases:
>100_bases GCCGAATAATGACAGTATTGAACCGCGGCGTCGACGGGAAGTGCCCCGGCTGCATAGACAGGGACCAGATTTCCTTTGCT TCGGAAGGTGGGCTGATTTG
Downstream 100 bases:
>100_bases AACTCTCCGTGCTGATCAACAATTTTAATTATGGGCAGTTCCTGCGCCCATGCATCGACAGCGTTCTGTCACAGGCCTAT CCCGACGTCGAGGTGATCGC
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Succinoglycan Biosynthesis Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Family Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Sulfatase; Glycosyltransferase Involved In Cell Wall Biogenesis; Group 2 Glycosyl Transferase; Arylsulfatase; Family 2 Glycosyl Transferase; Glycosyltransferase-Like; Glycosyl Transferase
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAA LAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPT KIWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQ EIAR
Sequences:
>Translated_324_residues MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAA LAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPT KIWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQ EIAR >Mature_323_residues TGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKKLSMVVVNHARPGKSGAMNAAL AVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIGGRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTK IWGPNTTVRRELLGSDVRFREDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERLG YGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRGYRAGLRQYAPTGNPSCRMTQE IAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36075; Mature: 35943
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKK CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LSMVVVNHARPGKSGAMNAALAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIG HEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC GRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTKIWGPNTTVRRELLGSDVRF CEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE REDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL HHHCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRG CCCCCHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH YRAGLRQYAPTGNPSCRMTQEIAR HHHHHHHCCCCCCCCCCHHHHHCC >Mature Secondary Structure TGPRISVIFSSFNGASRRLQQMLDSMLAQNLSSEQWELIAVNNNSNDETQQLLDRYTKK CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LSMVVVNHARPGKSGAMNAALAVARGALIVFTDDDIEADVNWLSAIVACAAANPDFGVIG HEEEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC GRILPNWEHYPQGDPLLDWIPMGSTFAIADDESSGLCDPTKIWGPNTTVRRELLGSDVRF CEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE REDIGPLPGGLFAMGEDTEIVNRLSRSGVKTYRCAEAIVHHWIPASSVTEAWVQKRGERL HHHCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GYGMPALFAEDIPKGVKIRGVPLRTWVESANWAVRAALLYPLPRSKKRFWAIWKYYYMRG CCCCCHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH YRAGLRQYAPTGNPSCRMTQEIAR HHHHHHHCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA